Leucoraja erinaceus (little skate): 129706369
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Entry
129706369 CDS
T09122
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129706369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leri03400
]
129706369
Enzymes [BR:
leri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
129706369
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129706369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
129706369
NCBI-ProteinID:
XP_055506609
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All DBs
Position
19:22481122..22494514
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AA seq
400 aa
AA seq
DB search
MRKSGPRTPAIMEAQPTVPGPPPGYGQHWYHNPSQQPVDVQPPDGYPPPGLLQPAPEAAP
AAPKRKRGRPAGTQQKKSEGAGTKRAKTGKSKGKQEKITDSFKTVKRKIDRFNGTTEAEL
LTKTLPDILTYGLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFLSGLIDVPLNHMDDG
SLPEKYGIGFTNMVERTTPGSKDLKSKEIREGGKILLQKLQKYKPRIAVFNGKCIYEIFS
KEVFGVKVKKMEFGQQPHQIPDGETVVYVMPSSSARCAQFPRAQDKVHYYIKLKELRNHL
KGIKSAPEVSEVEYSFDLHKAQADAKKMAIKEEKHDPGYDAAYGGPVENSADTNGQCNFA
TAEPAATSNSEFNADSTFCQVPDGQWMTQSFTDQIPSINN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagagcgggccccggacgcccgccatcatggaagcgcaaccgacggtccccgga
ccgccgccaggatacggccagcattggtaccacaatccgagccagcagcctgtggacgtc
cagccgcccgacggctacccgccgcccgggctcctacagccggcgcccgaggctgcaccg
gcagctccaaaacgaaaaagaggaagaccagcaggaacgcagcaaaagaaatctgaggga
gcaggaactaaacgagccaaaacgggaaaatcaaaaggaaaacaagaaaaaatcacagat
tcttttaaaaccgtgaagagaaaaattgatcgattcaacggaacaactgaagctgagctt
ttgactaaaactttgccagatatattgacctatggcttagacattgtgattattggaatt
aatcctggattgatggctgcgtacaaaggacatcattatcctggcccagggaatcatttt
tggaagtgcttatttctgtccggtcttattgacgtgcctttaaatcacatggacgatgga
tctttacctgagaaatatggaattggtttcacaaacatggtagagagaacaacaccagga
agtaaagaccttaaaagtaaagaaattcgggaaggagggaaaatacttttacaaaagcta
cagaaatataagccacggattgctgtttttaatggaaaatgtatttatgaaatatttagc
aaggaagtgtttggcgttaaggtcaagaaaatggaatttgggcaacagccgcaccagatt
ccagacggagaaaccgtggtctatgtcatgccctcttccagtgcaaggtgtgcacagttt
cctcgcgcccaggataaggtgcattattatatcaagctgaaggaactgcgaaatcatttg
aaaggcattaagagtgctccagaggtctcagaagttgaatattcatttgacttgcacaaa
gctcaagctgacgcaaagaaaatggcaatcaaagaagaaaaacatgaccctggctatgat
gctgcttatggaggtccagttgaaaattccgctgataccaatgggcagtgcaattttgct
acagctgaaccagcagcaaccagcaactctgaattcaatgcggactcaacattttgtcaa
gttcctgatggccagtggatgacccagtcatttactgatcagattccttcaataaacaat
taa
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