Leucoraja erinacea (little skate): 129708655
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Entry
129708655 CDS
T09122
Name
(RefSeq) plakophilin-1-like
KO
K10387
plakophilin 1
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129708655
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
129708655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_2
HEAT
HEAT_EZ
V-ATPase_H_C
ELMO_ARM
Adaptin_N
Cnd1
U3snoRNP10
Arm_2
LolA_3
Motif
Other DBs
NCBI-GeneID:
129708655
NCBI-ProteinID:
XP_055510524
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All DBs
Position
24:complement(13157749..13194070)
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AA seq
743 aa
AA seq
DB search
MAYLRTVTATQTFSKQDNSTLALPPADRLSTLGRVDSEKRVNNQVRLMMQNKKSPHGIIK
RDSSKEQWNTNQKDISNLGTRMQSISVGSYATQRPKSIHYSNGFSHMEDSQHYGSGFGRG
TRQRNIFSSYSMKGGRTISAPSGRKYSGPLSPQGDDVFFNGISTSRSEPDLVKVGTLPIM
RRVKNNNRTVNRTKSLYAKSARTWRSRQLSDKRSPADVKFAQSGIQFQTPKRAGSRKTGT
EGVREIDGDMNLRKAVALLNNPDPNMLVFASSYIQQECFKDDNAKATIYQMGAIPQLINL
LRSKDVNVQQSACAALRNAVYKSVINKGEVKRNDGIKQVLQLLRETRDPETKKQITGLLW
NLSSCDNLKEDLINDALPVLTDYVIIPHTSQGLKSPETMESETFHNATGCLRNLSSAGES
GRQRMRNSPGLIDSLMSHVQACIAVNQADEKSIENCICILHNLSYHLDSEVPSAFAHINE
NGNLQQTKKMSKRSSVGCFTPETDHLDEADLSNLYFSQEEDNPKGVSNLAHSKAVKMYTS
LLEKSKSDATLEASAGALQNLTAGNKVSSFLMSSALVNKEKAIPSVAKLLHSSNPDVQKT
AVSLLNNLSRHGNLQPQLASQTLPELARLLPGAGSSTKSSDDTIASACNIMRTLVPSNPT
LAKTVLQGSMLKNLMSLSKSSTNPSAGKAACLFLYEMWSQKDLHSFLRKEGFAKKDFVNN
LTSAAVKLAQQNVTRGLTKKFLR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcttatctccgtactgtgacggcgacccaaacattcagcaaacaggataattccacg
ctggcgctgccgccggccgacaggttgagcaccttgggtcgggtggacagtgaaaagcga
gttaacaaccaagtacgcctcatgatgcagaataagaaaagtccgcacgggataatcaaa
agagactcatcaaaagaacaatggaacaccaaccaaaaagacatttctaaccttggaact
agaatgcaaagtatttctgtggggagctatgcgactcagaggcctaagagtattcattat
agtaatggattttctcatatggaagacagccagcattatggatcgggatttggaagagga
actcggcaacggaacatattcagttcgtacagcatgaaggggggccgaacgatcagcgcc
ccgtccggtcgcaaatactctggcccgctgagtccgcagggtgacgacgtctttttcaat
ggcatttcgaccagccgaagtgaaccggacctcgttaaggtggggacgttaccaataatg
agacgggtgaaaaacaacaaccgaactgtaaatcggaccaagagtctttatgcgaaaagt
gccaggacatggcgttctcgccagctctcagataagagaagccctgctgatgtaaagttt
gctcagtcgggcatacaatttcaaactccgaagagggctggttccaggaagacaggaaca
gagggagtgcgtgaaatcgatggagatatgaacctaaggaaagcagtggctcttttaaac
aacccagatcccaatatgttggtgtttgcttcttcctacatccagcaggagtgctttaaa
gatgataacgctaaagcaacgatttaccaaatgggtgcaatccctcaactgattaacctt
ttgagaagcaaagatgtaaatgttcagcagtctgcatgtgcagccctgagaaatgcagtg
tataaaagcgtcatcaataagggggaagtaaagaggaatgatggaatcaagcaagtactt
cagctcctgagagagacacgggatcccgaaacaaagaagcaaataactggacttctgtgg
aacctgtcatcgtgtgataatctaaaggaggacctgatcaatgatgctttgccagtgctg
actgattatgtaatcattccccacacttcgcaaggacttaaaagtccagaaaccatggag
tcggaaacctttcacaatgctacagggtgtctgaggaatctgagctcggctggggagagt
ggtcggcagcggatgcggaactctcctggtttaattgattctctcatgtctcatgttcaa
gcatgtattgctgtaaaccaagctgatgaaaagtctattgaaaactgtatctgcatcctc
cacaacctatcgtaccacttagactcggaagtgcccagtgcctttgcccacataaacgag
aatggaaatttgcagcaaaccaaaaaaatgtcaaagaggtcttctgtgggctgttttaca
ccagaaacagatcacttggatgaggctgatttgtctaacttgtatttctctcaagaggaa
gataatcccaaaggtgtcagcaacctcgctcactcaaaagcagtcaaaatgtacacctct
cttttggagaaatccaagtctgatgccacattggaagcatctgctggagccctgcagaat
ctcacagccggcaacaaagtgtcatcgtttctgatgagttcagcattggtgaacaaggaa
aaggcaattcccagcgtggcaaagcttttacattccagcaatccggatgtacagaaaaca
gctgtttcattgttgaacaacctgtcaaggcacggtaatcttcagccacaattagcttca
cagacattgccagaactagctcggcttctccctggtgcaggcagttctaccaagtcttca
gacgacaccatcgcttcagcctgtaacatcatgcgaaccctggttcccagtaatccgact
ttggccaaaactgtgctgcagggatctatgttgaaaaacctgatgagtctcagcaaatcc
agtacaaatccctcagctggtaaagctgcctgccttttcctatatgaaatgtggagccag
aaagacctacacagttttcttagaaaggaaggatttgcaaagaaggactttgtaaataat
ttaacatcagctgcagtcaaattagctcagcagaatgtcacgcgtggcctgaccaaaaag
ttcctgaggtga
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