Leucoraja erinaceus (little skate): 129709516
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Entry
129709516 CDS
T09122
Name
(RefSeq) protein PML-like isoform X1
KO
K10054
E3 SUMO-protein ligase PML [EC:2.3.2.-]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04120
Ubiquitin mediated proteolysis
leri04144
Endocytosis
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129709516
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129709516
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129709516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129709516
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
129709516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PML_C
PML_CC
zf-B_box
ANCHR-like_BBOX
zf-C3HC4_3
zf-C3HC4
zf-RING_5
Exu_RNase_H_like
zf-RING_UBOX
Prok-RING_4
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
129709516
NCBI-ProteinID:
XP_055511938
LinkDB
All DBs
Position
25:complement(20409733..20427884)
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AA seq
809 aa
AA seq
DB search
MMCLIIFFFSIKAMEPGSDATLSGESVMCGVCCNQLRRPKLLPCLHSVCLECLQNVWVGQ
DFAICPICSAPTDGDITKVQDNTLLAKLVSKVQLQQRIDTGLDIWCSICQTCGSEEPATF
LCFTCDHFLCLRCFHGHQLLIEQHGHTVKSLENLKALSCEEFAILSRNERQATCPEHKDQ
QISFFCKTCSTSACCNCLLLHHTPQGHLYHDIKQEVRQEGEALKQMVDATQQTYSRFADS
HSELMTLEESMNLRRNEIEAAVKHQAFVIEQEIIGQGCSLKRELEDICKLELSRLANRLR
QTEQMLHRMEAGHKLADFILRLGTNNEMKDMIEPIRSGLMAMGQAMPFDSSKEVTSMEFR
ECPLEVKNLLGTFPLKREHGEEVKNPENEEERREEAKDPENEESPQEASGKVQVESSLSM
EDKSAPDSQSQHQSSEHSYSVSNTPPQLPSSTTTENGILNISSDTGDEWQQPAAEESIML
SSDDSEDDGIMVVDSSETAAVLVHPESSKDPTDHRANNGSGWMNGDLFQEGSSGMWQCQK
LRGHPVVFFQIKTTDVGDDDIVHLAAVSGEKVFNDYIMPCNPNLADVATARGFRVVDGVL
YLHGECLPACSLQYVMDSFLHFLQQLEMPVLAGYGIWNCDSPTLCRVWERLSMKNQFAQC
ISGFLDILWLAEKIVPKSMVKNYQLKHLVSILVGELEVCNEHTLRRLYVVLQPSLQQAED
SQFTLSQLECHISLQTLIKCKVISRLVADKLALQNISLKTLEVAYCSNPRMGLKNLMQAS
RNLGLSDIDRIIRNIREFLCQRAGTAGKV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtttaattattttcttcttctcaattaaggcgatggaacctggatcagatgcc
actctgtcaggtgaaagtgtgatgtgtggagtttgctgtaaccagctgaggagacccaag
ctgcttccatgcctgcacagtgtctgcctggagtgcctgcagaatgtgtgggtggggcag
gactttgccatctgtcccatctgcagtgcccccacagacggggacatcaccaaagtacaa
gacaacacactgctggccaaactggtgagcaaagtgcagctgcagcagaggattgatact
gggctggacatctggtgcagtatttgccagacttgtggcagtgaagagcctgccactttc
ctgtgtttcacgtgtgatcatttcttgtgcctgagatgcttccatggccatcagctgttg
attgagcagcatggacacacggtgaagtctctggaaaacctgaaggccctcagctgcgag
gaatttgccattttatcaaggaacgagaggcaggccacttgtccagaacacaaggaccaa
caaatcagctttttctgcaagacgtgttctaccagcgcctgctgcaactgcctgctgctt
caccacaccccccaaggtcacctttatcacgacattaagcaggaggttcggcaggagggc
gaagcgttgaaacaaatggtggacgcgacacagcaaacgtacagtagatttgcggacagt
cactcagaactgatgaccctggaagaaagcatgaacttgagaagaaatgaaattgaagct
gcagtgaaacatcaggcttttgtcatcgagcaagaaatcattggtcagggatgcagcttg
aagagggaattggaggatatatgcaagctggaactaagcagactggccaacaggctgaga
caaacagagcaaatgttgcacaggatggaagctggccacaagctggccgactttatactg
aggcttggcacaaataacgagatgaaagatatgatagaaccgattagatcaggcctgatg
gccatggggcaggcaatgcccttcgactcgagcaaggaggtcacctcgatggaattcagg
gaatgccctctggaagtaaagaacctactcggtactttccccctcaaaagagaacatgga
gaggaagtgaaaaacccagaaaatgaggaggagcggagagaggaagcgaaagatccagaa
aatgaagagtctccacaggaagcttccggaaaagtacaagttgaaagttctctttcaatg
gaagataaaagtgcaccagatagccagtcacagcaccagtccagtgaacacagctatagt
gtgagcaacacaccgccccagctcccctcgtcaactacgacagagaacggcatcctcaat
atttccagtgacacaggcgatgaatggcagcaacctgcggcagaggagtcaataatgctc
tcgtccgatgacagcgaggatgatggcatcatggttgtggactcctctgagactgccgcc
gtgctggtgcaccccgagagcagcaaagatccaactgaccacagagcaaacaacggttct
ggttggatgaacggggatttgtttcaggagggttcgtcgggaatgtggcagtgtcagaag
ctgcgaggccatcctgtggtcttcttccagatcaagaccaccgatgtgggagacgatgac
attgtgcacctagcagcagtgagtggcgagaaggtctttaacgattacatcatgccctgc
aaccctaacttggccgatgtggccactgcccgtggctttagggttgtggatggggtactg
tacctccatggggaatgtctgccagcctgcagcctccagtatgtcatggactctttcctc
cacttcctgcagcagctggagatgcctgtgttggccggatatggcatctggaactgtgac
tctccaactctttgcagagtttgggagagactgtccatgaagaatcaatttgcccagtgt
atttccggattcttggacatcctgtggttggccgagaaaattgtccccaagtcgatggtc
aagaactaccagctgaagcatttagtgagcatcttggttggcgagctggaggtttgcaat
gagcataccctgcggagactgtatgtggttctgcagcctagtctgcagcaggcagaagac
agccaattcactctgtcccagttggaatgtcacatatccctgcagactctcatcaagtgc
aaagtgatttcccgcctggttgcagacaaacttgcccttcaaaatatcagtcttaagacc
ttggaggtggcttattgcagcaacccgaggatgggcctgaaaaacctgatgcaagccagc
aggaacctgggtttgtcagacatcgataggatcatcaggaatatccgcgaattcttgtgc
cagcgggcggggactgcgggtaaagtataa
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