Leucoraja erinaceus (little skate): 129710403
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Entry
129710403 CDS
T09122
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04140
Autophagy - animal
leri05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129710403 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129710403 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129710403 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
leri04990
]
129710403 (plekhm1)
Membrane trafficking [BR:
leri04131
]
SNARE
SNARE associated proteins
Others
129710403 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
leri04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
129710403 (plekhm1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_11
PH_13
PHAX_RNA-bd
Motif
Other DBs
NCBI-GeneID:
129710403
NCBI-ProteinID:
XP_055513352
LinkDB
All DBs
Position
27:31265462..31330198
Genome browser
AA seq
1093 aa
AA seq
DB search
MNLYTMISTHSSENSAAPRDVKQRIKKKLAHSLKCLQKRYVNSDNVVTSDDCDANVLCCV
MESIFVHGLKSKHIKTNGGNRGQKGSRAPLPQPVFWTLLKMVTHHDVVTDLEKLNFINTD
VGRCRAWVRLALNDGLMECYLLSLLREKDSLCDFYHPVALLLDTEDSEVLLSYLQGLSSL
SFTLSYKSAVLNEWTTTPLVLAGLYSGQELAETSSPNLSEGRRKGSWDSASQSSGSDIIE
VIHTSSTALQNSQLGKLKAASSTLSLETTGSSQLSSSLSSDSLLQSNGMKSPDQTTEELW
SCETDKGIASAESSSQSLQVTPDELGEDQIPVSLDCNVSITISQPELSSMLPAVDITLNA
QSGKLVDRHICNEETNARTIESHSQIESPSSTYVSAFHHPETAHGSHLENGRKTVASHSE
KMLNPINSERLSNYNSRRILQSAACQKQEVEAADQVSVQSGIAHVIDQKNALSVHSTHLT
EPGENHKRSSWISDDDICKPSPQEALPRSTGESSTDHSIDTTPMNENSTGATKNRQPASE
LLQSTFRQEEASFEVTHRRKIGISNPFRGLLKLGNLERRGHVGIWKEYYCELSPFEFHLY
QSDDDRNCYENCSLLRCELLGRAHSDGRFHVVFAGKKLYLRAPSRDEAEDWIDRIREALE
QCRPHRTSKQESSHVEASMNEKPDSVSEPHVLHSAHQLNHKEENGFQRDFNWVSEAESQL
DAIKETVLYLLTGKTWTRYIFSLTLDALKYFKFQEQQKVLCSICKTETFKDVIPDTALGG
PANFKLITSEVTLRLQAESGAEARSWRELIRAVLSSFLEAEEDTLAANTGFEKNEKRLVE
LGLGEHKSLLQHLTVVPIEKGLDLQKFQCAGCSQKIGFSFGKAKVCAYSGLYYCEMCHQD
TETIIPSRMMHNWDLTKRGVSNVAARFLQQIKNEPFIDLDVINGSLYQYVEHMARARKSR
DQLKILEDYLFTCRSGAVQDLYKRLDQKKYLLESAHLYSVSDLRQIAHGMFEAFIQQAIH
YATNHVYMCDLCTQRGFICQICSSDDIIFPFEFESTTRCKKCRTVFHKVCKAGVQSCPRC
VRKQRYQDYKMGH
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtatacaatgatttctacacactcgtccgaaaactcagctgcacccagagac
gtcaaacagcggataaagaaaaagctggctcattccctgaagtgcttgcagaagcggtat
gtaaattcggacaatgttgtaaccagcgatgactgtgacgcaaatgtgctgtgctgtgtc
atggagtcgatatttgtacatggattgaaatcgaagcacattaaaacaaatggaggaaac
cgaggacagaaaggcagtcgagctcctcttccacagcctgtcttttggactctgcttaaa
atggtcactcatcatgatgttgtgacagatctggagaaattgaactttattaacactgat
gtgggccgatgtcgggcatgggtaagacttgcacttaatgatggcctgatggagtgttac
ttattgtccctacttcgtgaaaaggacagtctatgtgacttctaccatcccgtggctttg
cttcttgatacagaagacagtgaggttctactgagctatctgcaaggcctgtcatctctt
tcatttacattgtcttacaaatcagctgttctaaatgaatggactaccactcccctcgtg
ttggctggcttatactcgggacaagaactggcagaaacatcatcgccaaacttatccgaa
ggaaggaggaaaggttcttgggattcagcttctcagtcctctggttctgatatcattgag
gtgattcataccagttctacagctctgcagaacagtcaattgggtaaactaaaggctgca
tcctctacgttgagtttggaaacaactggatcatcccaactctcatccagcttgagctct
gacagcctccttcagtcaaatggaatgaagagtcctgaccaaacgacggaggaattgtgg
tcgtgtgagaccgacaaaggcattgccagtgccgaaagctccagccaatctctgcaagtg
acaccggatgaacttggagaagaccaaataccagtttccctggattgcaatgtttcaatt
actatatcacagcctgaattatcctcaatgcttccagcagttgatattacattgaatgct
cagtcgggtaaattggttgaccgacatatatgcaatgaggaaacaaatgcaaggacaata
gaaagccattcacaaattgaaagcccatcctctacctatgtttcagcctttcaccatcca
gaaactgctcatggatcacatcttgaaaatggcaggaaaactgttgcttctcacagtgaa
aagatgctaaatcctatcaattctgaaaggttatccaattacaactcccggagaattttg
caatctgcagcatgccagaaacaggaagtagaagctgcagatcaagtttctgttcagagc
ggaattgctcatgtgatagaccaaaagaatgcattgagtgttcacagcactcacttgact
gaaccaggagagaatcataaacgaagtagctggatatcagatgatgacatctgcaaacca
tctcctcaagaagcacttccgcgaagcacaggggaaagttcaactgatcattctattgac
acaacaccaatgaatgaaaatagcactggggctactaaaaatagacaaccagcttccgag
ctcttgcagagtacgtttcgtcaagaggaggcatcatttgaagtgacccatcgtcgaaag
attggtatttcaaacccgtttcgtggacttctgaagttgggcaatttagagaggagaggt
catgttggtatttggaaagagtattactgtgagttatcacctttcgagtttcatctgtac
cagagtgacgatgaccgcaattgttatgagaactgctctttactaagatgtgaactactg
ggacgtgcacacagtgatggaaggtttcatgtggtttttgctggcaagaagttgtacctc
cgagcaccctctcgagatgaagcagaggactggattgatcgaattcgggaagcattagaa
caatgtcgacctcaccgaacttcaaaacaagaatcatctcatgtagaggcctcaatgaat
gagaaacctgattcagtttctgagccacatgtccttcactctgctcaccagttaaatcac
aaggaagagaatggcttccaacgagattttaattgggtttctgaggcagaatcgcagtta
gatgcaattaaagagactgtactatacttgttaacaggcaaaacgtggactcgttacatc
ttctctttgacattggacgcactgaaatatttcaaatttcaggaacagcaaaaggtacta
tgcagcatctgcaaaactgaaacttttaaggatgtcatacctgacactgcattgggcggt
ccagctaactttaaattaattacatctgaggttactctgagacttcaggcagaaagtggt
gcagaagcaagatcgtggcgtgaactgattcgagcagttctatcatccttcttagaagca
gaagaagataccttggcagcaaacacaggcttcgagaagaatgaaaaaagacttgtggag
ctgggcttgggggaacacaagagccttctacagcatttgactgttgtacccatagaaaaa
gggttggatttgcagaaatttcaatgtgcaggatgctctcagaaaataggattttcattt
ggtaaagccaaggtttgtgcttattctggcctctactattgtgaaatgtgtcatcaggat
acagagactattattccatccagaatgatgcataactgggatctgactaaacgaggggtt
tccaatgtggcagcaaggttcctgcaacagatcaaaaatgagccattcattgatcttgat
gtgataaatggaagtctctatcagtacgttgaacatatggctcgggctcgtaagagtaga
gatcagttgaagatattggaagactatctcttcacgtgtcggagcggtgcagtccaggat
ctctataaaaggttggatcagaagaagtatctcttggaatcagcccatctatacagtgtc
tctgatcttcgacagatagcccatggaatgtttgaagcattcatacagcaggctatccat
tatgccaccaatcacgtctatatgtgtgacctttgtactcaacgaggcttcatctgccag
atctgcagcagtgacgacatcatcttcccttttgaatttgaatcaactacaaggtgcaaa
aagtgcaggactgttttccataaggtttgcaaggctggtgtccaatcgtgtccacgctgt
gtacgcaaacaaaggtaccaggattacaaaatgggacattag
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