Leucoraja erinaceus (little skate): 129710483
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Entry
129710483 CDS
T09122
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129710483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129710483
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129710483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_13th
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_1st
Ig_NUP210_5th
Ig_NUP210_7th
Ig_NUP210_8th
Ig_NUP210_4th
Ig_NUP210_14th
Ig_NUP210_16th
Ig_NUP210_9th
Ig_NUP210_6th
NUP210_Ig
Big_2
Motif
Other DBs
NCBI-GeneID:
129710483
NCBI-ProteinID:
XP_055513412
LinkDB
All DBs
Position
28:32059092..32172395
Genome browser
AA seq
1878 aa
AA seq
DB search
MAMGWAPLLLMALLPRHMSGAKLNVPKVLLPYSSTVKVNFTLQADEGCYGWFSTRPDIAT
IEPVYQNNTDCSNSAVISARSTQRTRLTSIIIAEETVTGQVLRCDVMVDKINQIEILSTT
RELYVDDSLLKLTVRALDEEGNTFSSLEGFIFVWSIVKNENSDNNAESPRKIRILKFSES
PYLPSAHIEKMEREGKQGDIILVSGLMTGTANLNARLHETIYKRVPAATIRLIILENIIL
SPAHDIYLLVGAFIHYRVTKIVNGIMTEVNMPSEQYRLELHSDKMRSDGEGNATVAKLDS
DSSIVTAVHTGRANLVLTYKNIHMQALSHLPNSTIFVVEVGFLGFFILPGERWVLEVERK
YEFTVEIYDKRSNKVYLSDNLNIATALPQSHFQTLKTTRNGSYHYVDVMLAGHTEIKATL
FGVVGQYLTTPITNSQAVIIYNSIILEPSILVFPWHPKPRCYRHIIKVIGGSGNFTWSSS
NETVALVTVKGLIATGDSRGFSIIRARDVENAIHFGEMQVNVLRPVSIEFVQSRVEAEVA
QYLYLWIMVYGLKETDDMETVPVNDCSLMNLAVDMDKQGVFKVIQGKLEADATHCTGISV
QAETPGHTLLTASAAFLEVHFSSSISIASYHRLRAIDPVAVAIVTLTSSKEMLFEGGPRP
WVLEPSGFFMDLTGEKKNKITIEQQWAPSMKKKSHHGFRVTCVALGEQFLTFKVGNQPSL
LNLNPAVEDVKVKLVCAVPTSVTLAPVYKSRERGLPCPLLQHNKQLVPVSFCRNTILELT
AYDQYGRKFDNFTSLFINWKSSNSSLGSLHPTLLMEMILRDDGSGQKRLHGNVFIYIIFS
FLKTGHRMVTVYRKKGTVSISVYLVGYQKTQPDFFPEVNSLFVPITASIDLLLVDDVSLV
PRNLTVYNHPDILEVIYLTEGSGYFFVNTTDAEVLTSTYMEAKNYIQVKPLQPGIVTLKA
YDLCLTCKGPARAEIHVSDILDFELDLIHKIEVGKSVAVNVRILDFFKQPFLNRYFHCMN
ISLQAASPIVTLEAISNLDKHAASYMMRAVTLGQTTLVATVKDKNCRKLSSSPRQIEVFP
PFRLIPRRVTLIIGGMIQVMSEGGPQPQSNIYFSINNHTIAKVNKLGQLTALVVGTAKMT
GIVQAVDDDTGRVVVFSQDEVTVEVIRLKGIKIHAPVTRLRTGTQVPVYVTGITSSQTPF
SFGNGVPGLTFHWTTTKREVIEIVTRHSEISLELSAEYNFAMLLHCRAQGKTGLKVMVNA
KDPSAGQFEKYVDMFSDEIQIMVFGILQLLPLSLPAEEVLMSPNSQLKLQTSRDGKALVS
YEVRKCPNNKSVIMEDGHGLLMSGHRTGSSALTVTSREYFGLNQTIVTGVRVAPVAYLSI
VTSPMLYITKNEELTALPLGMTLTFTVNFYDLSGDQFHAHNTELYLALNRDDLLLIGPGT
SNNTYVAQAANVGLTILAVWDNKHPGIADYIPIPIQYAIWPNISEHVVLSDVICFSSVLV
NQEGEPGNWYVLSNEVLQIDSGTGLGVTRGTGSTTVYYEIPGIVKTYRELTVTGVGKASI
SIHGFKHIVGLPKFNVYRFIVTTMNKDSSLRGDCSFAQIKATSKLKPESNLACSVRFNNI
VLQVFAGSVFSVEPEFIADTGQYSCTVMIKELPDAVFRELSTGGDTYVSVKASVLGGHYA
GQVGRTEIPFIPGFYMNQSAVSLSHKEPLINITIFGIDRVLNELEVQSQSSAIVVSEPIK
LLAVPNIVYTLSPANVSLLQQGMSCTNISVSSPLTRQVMHVAVTVLRTGSSSGTRDLSFE
EPTFFDQLVESYQVLMFTLFAVLATTAVIFIAYNAFLTRIQTIPVIYVSAPQQAGYTSAP
HCSNPRRRYLQSWLWSVR
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgggctgggccccgctgctgctcatggcgctgcttccccgtcacatgtccgga
gccaaactcaatgtccccaaggtgttactgccctactccagcaccgtgaaggtcaacttc
accctgcaggcggacgaagggtgctatggatggttttcaacccgaccagatatagcaacc
attgaacctgtgtatcagaataatactgactgttccaattcagcggtgatatctgctcgc
tctactcagcgtactcgcctcaccagcataatcatagcagaggaaactgtgacaggacag
gtgttgcgctgtgatgtaatggtggacaaaataaatcaaattgaaattttatcaacaact
cgggagttgtacgtggatgactcactgttaaaattaacagttagagccttggatgaagaa
ggaaatacatttagcagcttggaaggatttattttcgtttggagcattgtgaagaatgaa
aactcggataataacgctgagtcgccacgtaaaattcgaatactgaagttttcggaatcc
ccctacttaccatctgcacacatagaaaaaatggaaagagaaggaaagcaaggagacatt
attctcgtatctgggttaatgactggtactgctaacctgaatgcacgactgcatgaaact
atatataagcgtgttcctgctgcaacaatacgcctcattattctggaaaacattatttta
agcccagcccatgatatttacctattggtgggagcttttattcactacagagttactaaa
atagtaaatgggataatgacagaggttaacatgccatctgaacagtatagattggagtta
cacagcgataagatgcgctctgatggagagggaaatgcaactgttgctaaactggattct
gactcctccattgtcacagcagtacacacaggacgggccaacttagttctgacctacaag
aacattcatatgcaagcactttctcatttacctaacagtacaatatttgttgtggaagtt
ggctttctaggctttttcatcttgcctggagaaagatgggtgctggaagtagaacgaaag
tatgaatttacagtggaaatctatgacaaaaggagtaataaagtttatttatctgataat
ctaaatattgccactgcccttccacaatcacatttccaaactctgaaaacaacgaggaat
gggtcttatcattatgtggatgttatgttggctggccacacagaaattaaggcaacactc
tttggagtggttgggcagtatctgactacacctattaccaacagccaagcagtaattatt
tataactcaataatactggagccaagtattcttgtcttcccttggcaccccaagcctcga
tgttatcgacatatcattaaggttataggaggaagtgggaactttacatggtcatcaagt
aatgaaactgttgctctggtgacagttaaaggtttgatagcaactggtgacagccgaggc
ttcagcattatacgggcgagggatgtggaaaatgctattcacttcggcgaaatgcaagtc
aatgtgctcaggccagtcagtatagagtttgtccaatcccgagtagaggctgaggttgct
cagtatctttacttgtggattatggtctatggactcaaggagacggatgacatggaaaca
gttccagtgaatgactgctcactaatgaacttggcggtggatatggacaagcaaggggtg
ttcaaagtcatacaagggaaattagaggcagatgctactcattgcactgggatatctgta
caggcagagacaccaggccacacattactaacagcaagtgctgcatttctggaggtccat
tttagcagcagcataagcattgcctcttaccatcgacttagagctattgatccagttgct
gttgcaatagtcactctaacctcttcaaaagaaatgctgtttgaaggaggtcccaggcct
tgggtactggagccatcaggattcttcatggatctgactggtgaaaagaagaataagata
accattgaacaacaatgggctccgtccatgaaaaagaaaagtcatcatgggtttagagtc
acctgtgtagccttaggagaacagtttttgacatttaaagttggcaaccagccaagcttg
ctgaatctcaaccctgccgttgaagatgtaaaagtgaagttggtctgtgctgttcccacc
agcgtgacattggctcctgtgtataagtcacgagaacgtggtcttccatgccctctgctg
caacacaacaagcaattggtacccgtttctttctgcagaaacaccattttggaactaact
gcatatgaccaatatggacggaagtttgataactttacctctctgttcattaactggaaa
tcatccaactcttctctgggcagtcttcatcctacattactcatggaaatgattttaaga
gatgacggaagtggacagaagaggctacatggtaatgtatttatatatattatattttca
tttttaaaaacaggtcatagaatggttacagtttacaggaagaaaggaactgtgtccatt
tcagtatatttggttgggtatcaaaagactcagcctgacttcttccccgaagtgaatagc
ttgtttgtgccaataacggccagcattgatttattactggtggatgatgtgtccttggtc
cccagaaacctcactgtgtacaaccatcccgatatattggaagtaatctatttaactgaa
ggctctggatatttttttgttaatacgacagacgctgaggttttaaccagcacatatatg
gaagccaaaaattatatccaagtaaagccactgcaaccgggaatagtgacactgaaagct
tatgacctttgcctgacctgcaaaggtcctgccagagctgagatccatgtatcggatata
ttggattttgagctggaccttattcataagattgaagttggaaagtctgttgcagtaaat
gtgagaatcctggatttcttcaagcaaccctttttgaacagatactttcactgcatgaat
ataagcctgcaggcagcctccccaattgtcaccttagaagcaatttctaacttggataaa
catgctgcaagttacatgatgagagctgtgaccctgggccaaacaacgctagttgcaact
gtcaaagacaagaattgtcgcaagctgagctcctctccacgtcagatagaggtattccca
ccattcagactaatcccacgaagagtgacattgatcattggtggtatgatacaggtgatg
tctgaaggtggtccacaaccacagtccaatatttatttctctattaataatcacactatt
gccaaggtaaataaattagggcagcttactgccttggtggttggaacagcaaaaatgact
ggtattgtccaggctgttgacgatgacacaggaagagtggttgttttctctcaggatgaa
gtgaccgtagaggtgattcggctaaaagggataaagatccatgctccagtaactagactg
aggactggaactcaggtgccggtgtatgtgacaggaatcaccagttcccagactccattt
tcctttggtaatggggttcctggcctaacctttcactggacgacaacaaaacgggaggtt
atcgagattgtcacccgacattccgaaatttccttggagctctccgcagagtataatttt
gccatgttgctgcactgccgagcacaagggaaaacgggtttgaaggtcatggtaaacgca
aaggatccatctgcaggacagtttgaaaaatacgttgacatgttttctgatgagattcag
attatggtgtttggaatactacaactcttacctctctctctgccagcagaggaagtcctc
atgtcaccaaattcccaattgaagttacaaacgtctcgggatgggaaagctcttgtgagc
tatgaagtacgcaaatgtccaaataataagtctgtgattatggaggatgggcatggactt
ttgatgtccggacacagaactggttcttctgccctgacagtaacatcgcgcgaatacttt
ggattgaaccaaaccattgtaactggagtgagggtggctccagtggcatacctcagtatt
gtgaccagtccaatgttgtacataaccaagaatgaagaactgactgcccttcctcttgga
atgacattgactttcacagtcaacttttatgatctcagtggagaccagtttcatgcacac
aatacagaattatatttagctcttaacagggatgatctgctgttgattggaccgggcacc
agtaataacacctatgtggctcaagctgccaatgtaggattgaccatactggcagtttgg
gacaacaagcatcctggcattgctgactacatccccatacctatccagtacgccatctgg
cccaacatatcagaacacgtggtattgagtgatgtcatatgtttctccagcgtcctggtg
aatcaggaaggtgagcctgggaactggtatgtcttatcaaatgaagttctgcagatcgat
agtggcacaggattgggagttaccaggggcactgggtcgaccactgtctattacgaaatt
ccaggaattgtgaaaacctacagagagctcacagttactggtgtaggaaaagcctccatt
tccattcacggtttcaaacatattgtcggccttcctaagtttaatgtgtacagatttatt
gtgactacaatgaacaaagatagcagcctgaggggggactgcagttttgctcagattaaa
gctacatcaaaactaaagccagaatcaaaccttgcctgttctgtgcgatttaataatatt
gtattacaagtctttgcaggctctgttttctctgtggaacctgaattcattgcagataca
ggtcagtacagctgtacagtcatgataaaagaactaccagatgctgtgtttcgggagttg
agcacaggtggggacacctatgtctctgtcaaagcctctgttctcggaggacattacgcg
ggccaagtgggaagaacagagattcctttcatccctggattttatatgaaccaatcagct
gtttctctcagccataaagaaccactaataaacatcactatttttggcatagatagagtg
ttgaatgaactggaggtccaatctcaatcatctgccattgtagtgagtgagcccatcaaa
ctacttgcagtacccaatattgtttacacactgagccctgccaatgtcagccttctccag
cagggcatgtcatgcaccaatatcagcgtgtccagccctctgacacggcaggtgatgcat
gtggccgtcacagtgctgcgcactggatccagcagcggaacacgagatttgtcctttgag
gaacctactttctttgaccagctcgtggaatcctaccaggtgctgatgttcaccttgttt
gcagtcctggctacaacagctgtaatttttattgcttacaacgccttcttgacaaggata
cagactattcctgtaatttatgtttcagcaccacagcaagcaggttacacttcagcacct
cattgtagtaacccacggaggcgatatctgcagtcttggctgtggagtgttcgttga
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