Leucoraja erinaceus (little skate): 129713963
Help
Entry
129713963 CDS
T09122
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129713963
Ion channels [BR:
leri04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129713963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
LD_cluster2
Motif
Other DBs
NCBI-GeneID:
129713963
NCBI-ProteinID:
XP_055519359
LinkDB
All DBs
Position
37:10919823..10963340
Genome browser
AA seq
1192 aa
AA seq
DB search
MVTKLQRDQSWIPKVIKKKTCSTFLEDTTTQSQQQLCQCGYAREYHRSVAMEDNFGAAMV
SRWNTAEHTTEEPTDAFGDVEFFGKGRRHGKFVRLSSDTDPAIVYSLITQSWGIPPPNLV
VSVVGGDANLKMKAWLKDILRQGLVKAAQSTGAWIMTSGLQVGIGKYVGEAVRDHATAST
HTATKVVAMGIAPWGLIYKKQRLINTKGSFPIRYTVTSEESARHALDDNYSAFLLVDDGT
NRRPGGETQFHARLEQHILTRRTGIGGRGSIEIPVLCMLIQGGPNMLERIYGAIKNNIPW
LVLAGSGGIADVLAEALVGSFTEETSRKQVEAWLQKHAQAEDVPSLLKLMEKIVENKHLL
TVYNAEQEGVEDFDTIILKSLFKASKKKSTDAQAYLDELKLAVAWSRVDIARSQLFNGEI
LWKTSDLEDPMTAALVNDEPDFVKLFIDHGINMVEYLSYGRLEELYSSVADNSLLNGLLR
RKQAERRGTQGKGSKHTPGAPRTEEGPHRYTLSEVLKVLRDLMGDFCDPIYGELFQLSGS
RRGKALLNPQEDSYWKQKCANPWADLFIWAVLQRRGKMATYFWEMGGESVSSGLGADLLL
REMSRLEPEAEGAQVIKEMAARFQQLAVDVFNECYRHSEKRAFQLLVRRCPVWGRATCLQ
LATEADARTFLAHDGVQAFLSQVWWGDMDRNTKFWRLVLAYFCPPFIYSSLIKFRSSWEE
QGSTSPASESECTENDILLEPAGNSRDDETGARVSGRDRRPFCMLRWKQFWETPVTSFFS
NVIMYFAFLFLFAYVLILDLFPDGPSNAELVLYIWVLTIVFEEIRQTFFVSMDISVKKKV
KLYFQDMWNICDILAIGLFTIGVCARMFRDWYEAGRVVLCLDFMVFCFRLVHIFAVHKQL
GPKIIIVGKMMKDMFFFLFFLGVWLMAYGVATQGLLHHSETRASWIFRRVFYRPYLQIFG
QIPLNELDAAQIPNSNCTDDPVAILMEELPPCTNTYANWLVILLLTIFLLVANILLVNLL
IAMFSYTFNKVQEHSDIYWKFQRYKLIVEYHKRPALPPPFIIFSHLNIFIKRNIRRVPSV
KSKVFVMDFPESVASKLMTWEAVQKENYLVCRNRAKRESNMEQLKRTAQKVDTVLNYITD
IREHEGRLRVLEKQMDYCTEALTWLIESLMQSDLLKNAKAPPTLPDSSYKRD
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccaagctgcagagagaccagagctggatccccaaggtgattaagaagaaaaca
tgctccaccttcctagaggacaccaccacccagagccagcagcagctgtgccaatgtgga
tatgccagggagtaccaccgctcagtggcgatggaagacaactttggggcagcgatggtg
agcaggtggaacacggccgaacacaccaccgaggagccgacagacgcattcggggacgtg
gagttcttcgggaaaggacggagacacggaaagtttgtgcggctttcttcggacacggac
ccggccatcgtctacagcctgatcacccaatcgtggggcatcccccctcccaacctggtc
gtgtctgtggtggggggagatgcaaacctgaagatgaaggcgtggctgaaggacatcctc
cgccagggactggtcaaagctgcacagagcaccggggcctggatcatgacgagtgggcta
caggtgggtatcggcaagtacgtgggcgaggcagtgcgagatcatgccactgccagtacc
cacaccgctaccaaggtggtggccatgggcatcgctccgtgggggctcatctacaagaaa
caacggctcatcaacaccaagggttcgttcccgatccgttacacggtgaccagcgaggaa
tcggcccgccacgcgctggacgacaactactcagcgttcctgctggtggacgacggcacc
aaccggcggccgggcggcgagacccagttccacgcccgcctcgagcagcacatactcacc
cgcaggacgggcatcgggggtagagggagcattgagatcccagtgttgtgtatgctgata
caaggaggtcccaacatgttggagaggatctacggagccataaagaacaacattccgtgg
ctggtcctggccggatcgggtgggatcgcagacgtccttgccgaggccctggtgggctcc
ttcaccgaggagacttccaggaaacaagtggaagcgtggctgcagaaacacgcccaggct
gaggatgtgcccagcctgctcaagctgatggagaagattgttgaaaataaacatttgctg
acggtctacaatgctgaacaggagggtgtagaggactttgacacaatcattttgaaatcc
ttgttcaaagcctcaaagaagaagagcacagatgcgcaggcgtacctggacgagctgaag
ctggccgtggcctggagcagagtggacatcgcccgcagccagctgttcaacggggagatc
ctctggaagaccagtgatctggaggatcccatgacagcagcgctggtcaacgatgagcca
gacttcgtgaagctcttcattgaccacggcatcaacatggtggaatacctgtcgtatgga
cgtctggaggaactctacagctcggtggccgacaactcactcctcaacggcctcctgcgc
aggaagcaggcggagcgccgcggcacgcagggcaaggggtccaagcacacgccgggtgcc
ccgcggacagaggaggggccgcaccgatacacgctgtccgaggtgctgaaggtgctgaga
gacctgatgggggacttctgcgatcccatctacggagaactcttccagttgtccggttcc
cgcagggggaaggcgctgctgaaccctcaggaggattcgtactggaagcagaaatgcgcc
aacccctgggctgacctgttcatctgggccgtgctccagagacgcggcaagatggccacg
tacttctgggaaatgggcggagagtcggtgtcgtcgggactcggagccgacctcctcctc
cgggagatgtcccgcctggaacctgaggcggaaggggctcaggttataaaggagatggcc
gctaggtttcagcaactggcagtcgacgtctttaacgagtgttaccggcacagtgagaag
cgggccttccagctgctggtccgtcggtgcccggtgtggggcagagccacgtgcctacag
ctggccaccgaggccgacgcacgcaccttcctcgcccacgacggagtccaggccttcctc
agccaggtgtggtggggcgatatggacaggaacacgaagttctggaggctggtcctcgca
tacttctgcccccccttcatttacagcagcctcatcaagttcaggagcagctgggaggag
caagggtccactagcccggcctctgagtcggaatgtaccgaaaatgatattctgctggag
ccagcgggaaactccagagatgatgagacgggcgcgagggtgagcggcagggaccgtcgg
ccgttctgcatgctccggtggaagcagttctgggagactccggtcacctcgttcttcagc
aacgtcatcatgtactttgcgttcctcttcctcttcgcctacgtcctaatcttggacctg
ttccccgatggcccgtccaacgccgaacttgtcctctacatctgggtcctcaccatcgtc
ttcgaggagatccgacagacgttttttgtcagcatggacatctcggtgaagaagaaagtg
aagctttacttccaggacatgtggaacatctgtgacatcctggccatcggcctcttcacc
atcggggtctgcgccaggatgttcagggactggtacgaggccggccgcgtggtcctctgc
ctggacttcatggtcttctgcttccgcctggtccacatcttcgccgtccacaaacagctg
gggccgaaaatcatcatcgtgggcaaaatgatgaaggacatgttcttcttcctcttcttc
ctgggcgtctggctgatggcgtatggagtggccacacaggggctgctgcaccacagcgag
acccgggccagctggatcttccgacgggtcttctacagaccctacctccaaatcttcggc
caaatcccactgaacgagctggatgctgctcagatccccaactccaactgcacggatgac
ccggtggcgatcctgatggaagagctcccaccctgcaccaacacctacgccaactggctt
gtcatcctcctgctcaccatcttcctgctggtcgccaacatcctgctggtcaacctgctc
atcgccatgttcagttacaccttcaacaaggtgcaggagcacagtgacatctactggaag
ttccaacgctacaagctgatcgtggagtaccacaagcggcccgccctgcctccacccttc
atcatcttcagtcacctcaacatcttcatcaagaggaacatccgcagggtcccctccgtg
aagagcaaggtgttcgtgatggacttccccgagtcggtggccagcaagctgatgacatgg
gaggcagtgcagaaggagaactatctcgtgtgtcgcaacagggccaagcgagagagcaac
atggagcagctgaagaggacagcgcagaaggtggacacggttctgaactacatcaccgac
atcagggagcacgagggacgcctcagagttcttgagaaacagatggactattgcacagaa
gccttaacctggttgatcgaatccttaatgcaaagtgacctgctgaagaatgccaaggcc
ccaccaacattaccagattcctcctacaagagagactaa
DBGET
integrated database retrieval system
