Leucoraja erinaceus (little skate): 129714498
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Entry
129714498 CDS
T09122
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03272
Virion - Hepatitis viruses
leri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
129714498 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129714498 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129714498 (ldlra)
Membrane trafficking [BR:
leri04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
129714498 (ldlra)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
TMEM154
Motif
Other DBs
NCBI-GeneID:
129714498
NCBI-ProteinID:
XP_055520116
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All DBs
Position
39:complement(4073199..4091822)
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AA seq
876 aa
AA seq
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MGGSRLPFTVPAADMTRPLLLPLAALLLLTAVVDAIGLCDRDHFECGDGKCILSRWLCDG
QSECEDDSDESLETCKNKTCGSREFSCGGRVNKCIPASWRCDSATDCENRSDEENCPVHV
CKDNEFQCHDGNCVSLQFTCDEEDDCADGSDELQCPPRTCEPAMFQCDNGMCIPRLWACD
GDPDCPDKSDEFSQSCGRPTTFERPNPCTALEFHCATSGECIHVKWRCDGSADCRDKSDE
ESCAVTTCHPDEFQCEDGTCIHGSLQCNKQFDCHDHSDEVGCVNVTRCEGPHKFKCRSGE
CILLDKVCDKRRDCRDWSDEPVKECGDNECLKENGGCSHICRDLKVGYECLCRPGFRLVD
NTKCEDIDECENPDTCSQICMNLNGGFKCECNGGYQMDPVTQQCKAIGTVAYLFFTSRHA
VRKLTLDRSEYTQLVPSLKHVVALDMEVATNKIYWADMDQKKIFSSLMDQAENSSHHSTV
IETEIEAPDGLAVDWIHQNIYWTDYRASTVSVANTAGTKRKVLFKEAVSKPRAIVVDPVH
GFLYWSDWGSPAKIEKGGLNGVDRTSLVSEGIQWPNGITLDLENQRLYWVDSKLHTLSSI
GVAGDNRKTLIISEDKLAHPFSLALFEDTVFWTDIEHEAIFSANRLTGGDILTVIENLDG
PQDIVLYHHLRQPKGINWCEQNGQVNGGCEHLCLPAPQITSHSPKYTCVCPDGMQLGSDM
KRCVAADVVLVKASTAQTPSHRAMTTTTASPTAARKVTTLGTNTARTNPTTRPTVQEMLT
ASQKAVKSEVAADAAVRKHGGTNALWIVLPLAILALLSTAVYFIWKNWRLKNTNSINFDN
PVYQKTTEDDEVHISRNQVGYTYPTRAVVSLDDFGA
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggagccggctcccattcactgtgccggccgccgacatgacaagaccactgttg
ctgccgctcgctgctctactgctactcacagccgtggtcgacgctattggactgtgtgat
cgggaccactttgagtgtggtgatgggaaatgtattctttcacgctggctttgtgatgga
cagtccgaatgtgaagatgattcggatgaatcgctggagacttgcaagaataagacctgt
ggctcccgtgagttcagctgtggtggacgtgttaacaagtgcatcccagcgtcctggcgc
tgtgactctgcgactgactgtgagaacaggtctgacgaggagaattgccctgtccatgtc
tgcaaagacaatgagttccagtgccacgatggaaactgcgtctctctgcagtttacctgt
gacgaagaggatgactgtgctgatggcagcgacgaactacagtgtccgccacggacctgt
gaacccgcaatgttccagtgtgacaacggcatgtgcatcccaaggctgtgggcttgcgat
ggtgatcccgattgccccgataaatcagacgaattctcacagagctgcggacgtccaaca
acatttgaacgtcccaatccctgcactgccctcgaattccattgtgccaccagtggcgag
tgcatccacgtgaaatggcgctgcgacggctccgcagactgcagggataaatctgacgag
gagagctgtgctgtgacaacctgccaccctgatgaatttcagtgtgaagatgggacgtgc
attcatggaagtcttcagtgcaacaaacagtttgactgccatgaccacagcgatgaagtt
gggtgtgtcaatgtgacccggtgtgaaggtccccacaagttcaaatgtaggagtggggag
tgtatcctcctggacaaagtgtgtgacaagcggcgtgattgccgagactggtccgatgag
cccgtgaaggagtgtggtgataatgaatgcctgaaagaaaatggaggctgttcacacatc
tgtagagatctgaaggtcggttatgaatgtctctgtcgacctgggttccgactggttgat
aataccaaatgtgaagatattgatgagtgtgagaacccagatacatgcagtcagatttgc
atgaacctgaatggtggattcaaatgtgagtgcaacggaggatatcaaatggatccagtg
actcagcaatgcaaagcaattgggactgtggcatatttgttcttcaccagccggcatgct
gtcagaaaactgactcttgatcggagtgagtacacccagctggtccccagtctgaagcac
gttgtggcacttgacatggaggtggccacaaacaagatctattgggcggacatggatcag
aagaaaatcttcagttccctaatggaccaagctgagaactcttctcatcattctacagtg
attgagactgagattgaagcaccagatggtctggctgttgactggattcaccagaacatc
tattggacagattaccgtgccagtactgtctctgtggctaacaccgctggaacaaaaaga
aaagtcctcttcaaagaagcagtttcaaagcccagggccattgttgtggatcctgtccat
gggtttctgtattggagtgattggggctcccctgccaagattgagaaaggtggtttgaat
ggagtggatcgtacgtcactagtcagtgaagggattcaatggccaaatggaatcaccctg
gatttggagaatcagagactctattgggtagactccaaattgcacactttgtccagtatt
ggtgttgctggtgacaacaggaagaccttgatcatctcagaagacaagttggctcatccc
ttttccctggctctatttgaggatacggtcttctggacagacattgagcatgaggctatt
ttcagtgccaaccggctcactggtggtgacatcctcacggtcattgagaacctcgacggt
ccccaagacattgtcctctatcaccatcttcggcagcccaaaggtattaactggtgtgag
cagaatgggcaggtaaatggtgggtgcgagcacctctgccttccagcaccacagatcacc
tcgcattctccaaagtacacgtgcgtttgtcctgatggcatgcaactggggtcagacatg
aagcgctgtgttgcagctgacgttgtactcgtcaaggcgagcacagcccaaacaccgagt
caccgtgcgatgaccaccacaacagccagccccactgcagccaggaaagtcaccaccctc
ggcaccaacactgctcgcaccaatcccaccacacgtcccacagtccaggaaatgctcacc
gcttcacagaaagcagtgaaaagtgaggttgcggctgatgcagctgttagaaaacacgga
ggaacgaatgcattgtggattgttctaccactggcaatcctggcgctgctcagcactgct
gtgtatttcatatggaaaaactggaggctgaagaacaccaacagcatcaactttgataac
cctgtgtaccagaagaccactgaagatgacgaggtccacatcagccgaaaccaggtcggc
tacacctatcccacgagagctgtggtaagcttggatgactttggtgcttga
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