Leucoraja erinaceus (little skate): 129714719
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Entry
129714719 CDS
T09122
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00600
Sphingolipid metabolism
leri00604
Glycosphingolipid biosynthesis - ganglio series
leri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
129714719
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
129714719
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
leri01003
]
129714719
Enzymes [BR:
leri01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
129714719
Glycosyltransferases [BR:
leri01003
]
Glycan extension
Glycolipid
129714719
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Glyco_tranf_2_2
Glyco_tranf_2_5
Motif
Other DBs
NCBI-GeneID:
129714719
NCBI-ProteinID:
XP_055520468
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Position
40:2855103..2890866
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AA seq
548 aa
AA seq
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MTAATRKRLKARLLSNTSCLFGRMRPLKKIACTSLLVAVVVGVLCELTGTKWRYRMAVDI
HYQMESIPYGQHNYEFTKSLLNGSMFRWKESVVRQLTRKDCKCEKEESSLGGMLNWSTVT
ELETAFNAAERHEVKQRREKEYQHFQQRTKTSADTLLIARANSPLEYPIQGVEVRPLKSI
LIPGLSLQAKNWRRYEVNVTASLGTFDVAAEVDEVTVDGAGQMHLSLSSAQVDNLNRQLQ
FITYTNTIFNPNTADTVQLKTPGHRAAFTIKIRHPVIPKLYNVKSQSGYNISALVTIATK
TFLRYDKLRELISSIRRFYPTVAIVIADDSSNPQKIEGPFVEQYFMPYRKGWFAGRNLAV
SQVQTKYLLWVDDDFIFASDTKLEKMVEILEKTTLDMVGGSVREVTQYSATFQHMMSVEQ
GGKDGDCLTIRKGYYHEVEGFPNCVVTDAIINFFMARTNKVQQVGFDPLIARQGHLEFFI
DGLGLLHIGSCSDIKVDHASKIVMPWTKQSVSERLYKAFRYVQPAEADGRLQEKLLYFKN
RLKCMKNK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagcaacccgcaaaagattgaaggcccgtttgttgagcaatacttcatgcctt
tttggaaggatgcgtccattgaagaagatcgcctgcacctcgcttctggtggctgttgtg
gttggcgtgctgtgcgaactcactgggaccaaatggcggtataggatggccgtggacatt
cactatcaaatggaaagcattccatacggccagcacaattatgaattcacgaaatctctg
ctgaatggttcaatgttcagatggaaagagtcggtggtcaggcagctgacaagaaaggat
tgcaaatgtgaaaaggaagaatcctcactcgggggcatgcttaactggagcactgtgact
gagctggagacggccttcaatgcagccgaacggcatgaggtgaagcagaggagagagaaa
gagtaccaacactttcagcaaaggacgaagacttcagccgacactctgctcatcgcccga
gcaaactcccctctggagtatccaatacaaggtgtcgaggtgcgaccattgaaatccatc
ttaataccaggtttgagcctgcaagcaaaaaattggcgtcgttatgaggtcaacgtgacg
gcctcgctcgggacctttgacgtggctgcggaggtggacgaggtgacggtggacggtgcc
gggcagatgcacctgtctctctccagcgcccaggtagacaacctgaaccgccagctccag
ttcatcacctacaccaacaccatcttcaaccccaacacggccgacacggtgcagttgaag
acacctggacaccgggcggcgtttaccatcaaaatccgtcatcccgtcatcccgaaacta
tataacgtcaagagtcagtcaggatataacatcagtgcactggtgacgatcgccaccaaa
accttcctgcgctacgacaagctgagagagctgatatcgagcattaggaggttttatccc
accgtcgccattgtaatcgcggatgacagcagcaacccgcaaaagattgaaggcccgttt
gttgagcaatacttcatgccttataggaagggttggttcgctgggcggaacctggctgtc
tcccaagtccaaacaaagtatctactgtgggtcgatgacgactttatcttcgcttcggac
accaaattggaaaagatggtcgagatcctggagaaaaccaccctggatatggttggagga
tctgtgagggaggtaacccaatattctgcgacgtttcaacacatgatgagcgtggagcag
ggcggcaaagatggcgactgcctgaccatccgcaagggctactaccacgaagtggaggga
ttccccaactgcgtggtcacggacgccatcatcaacttcttcatggctcgcacaaacaag
gtgcaacaagtgggattcgacccactcattgcccggcaggggcacttggagtttttcatc
gacggcctgggcctgctccacatcggctcttgcagcgacatcaaggtggaccacgcctcc
aagatcgtgatgccgtggacgaaacagagcgtgagcgagcggctgtacaaggccttccgg
tacgtgcagccggctgaggcggacgggcggctacaggagaagctgctctacttcaagaac
cggctgaaatgcatgaagaacaaatga
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