Candidatus Legionella polyplacis: CCU22_00550
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Entry
CCU22_00550 CDS
T05191
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
les
Candidatus Legionella polyplacis
Pathway
les03030
DNA replication
les03410
Base excision repair
les03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
les00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCU22_00550
03410 Base excision repair
CCU22_00550
03420 Nucleotide excision repair
CCU22_00550
03430 Mismatch repair
CCU22_00550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
les03032
]
CCU22_00550
03400 DNA repair and recombination proteins [BR:
les03400
]
CCU22_00550
Enzymes [BR:
les01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CCU22_00550
DNA replication proteins [BR:
les03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CCU22_00550
DNA repair and recombination proteins [BR:
les03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CCU22_00550
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCU22_00550
MMR (mismatch excision repair)
DNA ligase
CCU22_00550
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CCU22_00550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
PTCB-BRCT
RNA_pol_A_CTD
DNA_ligase_ZBD
DUF5001
Motif
Other DBs
NCBI-ProteinID:
ATW01720
LinkDB
All DBs
Position
complement(109508..111556)
Genome browser
AA seq
682 aa
AA seq
DB search
MRSNIKKFIKELRKKIKLYDYYYYNLNRSLVSDFVYDKCFEQLKELEIKYPEYINSNSPT
QLIGTNPSSCFKKIFHKKSMLSLSNVYSFEELKKFFNCICKKYFKDINSIFFTCEPKFDG
VAINLVYKDGKLVHAITRGNGLVGEDVTVNVKNISDIPLILPKNVNFNFIEIRGEIYIAK
KDFLLVNKIAKFSNKSVFATARNAASGVLRRLNNNLYQNVPLSIYCYGIGSFSGFFLPNS
HFFRLQFLKSIGFKISSKIKLVKGLDSCFFYYEQLRKSRISFPYEIDGIVCKVDNICLQD
KLGYSARFPKYACAYKFLSIEKESRIISVDFQVSRFGVLTPVAKLDPICINGVVIKRVTL
NNFNDIYRKDIHIGDFVKICRSGDVIPKILSIILEKRTCFVKKINFPKNCPVCNSFVISN
FKRSVFFCTGGLFCLAQLKRTLKHFSSSEAMDIRGVGVSIINKLVEINLVRSISDLYSLR
INDFLKVPGIGLKSSKKLFKSIKNSKNTTFARFLYALGIKGIGVVHSRLLSFNFQTIKDL
KLATLDKLLSIKNIGFTRAKNILSFLNEKKNLDVINELLDFGISWKINIKLLNNKNFDFF
NGKIIVFTGTLTKIKRKDIKMYMLNMGATINNHISKNTDYLIKGINPGSKLNKAIKFGIN
ILNESNFFKILKMYNNDFKNEK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagatctaatataaagaaatttattaaagagttaagaaaaaaaattaaactttatgat
tattattattataatcttaatagatctttagtttcagattttgtttatgataagtgtttt
gaacaattaaaagaattagaaataaaatatccagaatatatcaattctaattctccgaca
caattgattggtacaaatcctagtagttgttttaaaaaaatttttcataaaaaatctatg
ttgtcattatcaaatgtttattcttttgaagaattaaaaaagttttttaattgcatttgt
aaaaaatattttaaggatattaatagtattttttttacttgtgaaccaaaatttgatgga
gtagcaattaatttagtttataaagatggaaaattagtgcatgctataacacgtggaaat
ggattggttggagaagatgttactgtgaatgtaaagaatatatctgatattccattaata
ttaccaaaaaatgtaaattttaatttcattgaaattcgaggagaaatatatattgcaaag
aaagattttcttttagtgaataaaatagctaaattttcaaataaatctgtttttgctact
gctagaaatgcggcttcaggtgttttacgtagattaaataataatttatatcaaaatgta
ccattatcaatatattgttatggtattggttcttttagtggtttttttttaccaaatagt
catttttttcgattacaatttttaaaaagtatagggtttaaaataagttctaaaattaaa
ttggttaagggattagattcttgttttttttattatgagcagcttagaaaaagtcgtata
agttttccatatgaaattgatggtatagtatgcaaagttgataatatttgtttacaagat
aaactaggatattcagctcgttttccaaaatatgcttgtgcatataaatttttatcaata
gaaaaagaatctaggataatttcagtagattttcaggttagtagatttggtgttttaact
ccagtagctaagttagatcctatttgtattaatggagtagtaattaaaagggttacttta
aataattttaatgatatttatcgaaaagatattcatattggtgattttgttaagatatgt
agatctggagatgttattcctaaaattttatctattattttggaaaaaagaacttgtttt
gttaaaaaaataaattttcctaaaaattgtcctgtttgtaattcttttgttattagtaat
tttaaacgatctgtatttttttgtactgggggattgttttgtcttgcccaattaaaacga
acattaaaacatttttcctcaagtgaggctatggatattaggggagttggtgtatctata
attaataaattggttgagatcaatttggttagatctatatctgatttatattctttgcgg
ataaatgattttttaaaagtaccaggaataggtttaaaatcttctaaaaaactttttaaa
tctattaaaaatagtaaaaatactacgtttgcaagatttttatatgctttaggtattaaa
gggataggagtagtacattcacgtttgttgtcttttaattttcaaacaattaaagattta
aaattagctacattggataaattgttatctattaaaaatattggatttacacgtgcaaaa
aatattttgtcatttttaaatgaaaaaaaaaatttagatgtgattaatgagttattagat
tttggaatttcttggaaaataaatattaaattattaaataataaaaattttgattttttt
aatggaaaaattattgtttttactggaacattaactaaaataaagcgaaaagatattaag
atgtatatgttgaatatgggagctacaattaataatcatatttctaaaaatactgattac
cttattaaaggcattaatcctggttcaaaattgaataaagcgattaaatttggaattaat
attttaaatgaaagtaatttttttaaaatattaaaaatgtataataatgattttaaaaat
gaaaagtaa
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