Leclercia sp. W6: DVA43_01210 Help Entry DVA43_01210       CDS       T08905                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ley  Leclercia sp. W6 Pathway ley03030   DNA replication ley03410   Base excision repair ley03420   Nucleotide excision repair ley03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ley00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     DVA43_01210    03410 Base excision repair     DVA43_01210    03420 Nucleotide excision repair     DVA43_01210    03430 Mismatch repair     DVA43_01210  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ley03032]     DVA43_01210    03400 DNA repair and recombination proteins [BR:ley03400]     DVA43_01210 Enzymes [BR:ley01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      DVA43_01210 DNA replication proteins [BR:ley03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      DVA43_01210 DNA repair and recombination proteins [BR:ley03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      DVA43_01210    NER (nucleotide excision repair)     GGR (global genome repair) factors      DVA43_01210    MMR (mismatch excision repair)     DNA ligase      DVA43_01210   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       DVA43_01210 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH RNA_ligase DUF2229 Motif Other DBs NCBI-ProteinID:  AXF58273 LinkDB All DBs Position 236475..238490 Genome browser AA seq 671 aa AA seqDB search MDSIEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELEAQHPELITPDSPTQ RVGAAPLAFFSQVRHEVPMLSLDNVFDEESFLAFNKRVQDRLKHTDALSWCCELKLDGLA VSILYENGVMIRAATRGDGTTGEDITANVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG FEKINEEARRTGGKIFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGELPDTHL GRLLQFKAWGLPVSNRVQLCDSPEAVLAFYRQVEADRPTLGFDIDGVVIKVNSLALQEQL GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVQVAGVLVSNATLHN ADEIDRLGLRIGDKVVIRRAGDVIPQVVNVVESERPDDTRPVEFPTHCPVCGSDVERVEG EAVARCTGGLVCGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFRLTPG KLTGLDRMGPKSAQNVADALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEK ATIDELQKVPDVGIVVATHVFNFFSEESNRDVIGQLLNEGIRWSAPVAINADEIDSPFAG KTVVLTGSLSQLSRDDAKARLTALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGITVI DEDEMLRLLGE NT seq 2016 nt NT seq  +upstreamnt  +downstreamnt atggactcaatcgaacaacaactcaccgaactgcgaaccacgcttcgccaccatgaatat ctctatcatgtgatggatgcgccggaagtgccggacgcggagtatgaccgtctgatgcgt gagctgcgcgagcttgaagcgcagcaccccgaattaatcacgccggactcgccaacccag cgcgtcggggcggcaccgctggcctttttcagccaggtccgtcatgaagtgccgatgctg tcgctggataacgtctttgatgaagagagcttcctcgccttcaacaaacgcgtccaggat cgcctgaagcataccgatgccctgagctggtgctgcgagctgaagctggatgggctggcc gtcagcattctgtacgaaaatggcgtgatgatccgcgcggccacccgcggcgatggcacc actggcgaggacattaccgccaatgtgcgtaccatccgcgccattccgctcaaattacat ggcgagaacattccggcacgtctcgaagtgcgcggcgaagttttcctgccccaggcggga tttgaaaaaattaacgaagaggcgcgtcgtaccggcggcaaaatcttcgctaacccccgc aatgccgccgccggatcgctgcgccagcttgacccgcgtattaccgcgaagcgcccgcta acgttcttctgctatggcgtcggcatcctggaagggggcgagctgcctgatacccatctg ggccgtttgctgcagtttaaagcctgggggctgccggtcagtaaccgggtgcagctgtgc gactcgccggaggccgtgctggcgttttatcgtcaggttgaagccgatcgtccgacgctg ggcttcgatatcgacggggtggtgatcaaagtcaactccctcgcactgcaggagcagctt ggctttgtcgcccgtgcgccgcgctgggcggtagcctttaagttcccggcgcaggaacag atgacctttgtgcgtgacgtagagttccaggtggggcgaaccggggcgataacgcctgtc gcgcgtctggagccggttcaggtggccggggtactggtcagcaatgcaaccctgcacaac gccgatgagatcgatcggcttgggctgcgtattggcgataaggtggtgatccgccgtgcc ggggacgtgatcccgcaggtggtgaacgtggtggaatcagagcgtcctgacgatacgcgc cccgttgagttcccgacccactgtccggtgtgcggctcagatgttgagcgcgtcgaaggg gaggccgtagcccgctgtaccggcggtttggtctgcggcgcccagcgcaaagagtccctg aaacatttcgtctcccgccgggcaatggatgtagacggtatgggcgataagatcatcgac cagctggtggaaaaagagtatgtccatacgccagccgatctgttccgcctgacgcccggt aagctgaccgggctggatcgcatggggcctaaatctgcccagaacgtggccgatgcgctg gaaaaggccaaagagaccacctttgcccgtttcctctacgcactgggtatccgcgaagta ggcgaagcgacggcggcagggctggcggcatatttcggtacgctggaggcgctcgaaaag gcgacgatcgacgaactgcaaaaggtgccggacgttggcatcgtggttgctacccacgtc tttaacttcttctcggaagagagcaaccgcgacgttatcggtcagttgcttaatgaaggg atccgctggtctgcgccggtggcgatcaacgccgacgagatcgatagcccctttgccggc aaaaccgtggtgctgaccggtagcctgagccagctttcacgcgatgatgctaaagcgcgt ctgacggcgctgggggcgaaagtggctggcagcgtgtcgaagaaaaccgacctggtgatt gccggtgaagcggcgggctctaaacttgccaaagcgcaggagctgggcattacggtcatc gacgaagacgaaatgctgcgtctgttgggagagtaa

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