Leclercia sp. W6: DVA43_17135 Help Entry DVA43_17135       CDS       T08905                                  Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ley  Leclercia sp. W6 Pathway ley03030   DNA replication ley03410   Base excision repair ley03420   Nucleotide excision repair ley03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ley00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     DVA43_17135    03410 Base excision repair     DVA43_17135    03420 Nucleotide excision repair     DVA43_17135    03430 Mismatch repair     DVA43_17135  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ley03032]     DVA43_17135    03400 DNA repair and recombination proteins [BR:ley03400]     DVA43_17135 Enzymes [BR:ley01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      DVA43_17135 DNA replication proteins [BR:ley03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      DVA43_17135 DNA repair and recombination proteins [BR:ley03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      DVA43_17135    NER (nucleotide excision repair)     GGR (global genome repair) factors      DVA43_17135    MMR (mismatch excision repair)     DNA ligase      DVA43_17135   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       DVA43_17135 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_5 RNA_ligase DUF3701 HHH Motif Other DBs NCBI-ProteinID:  AXF61143 LinkDB All DBs Position complement(3520530..3522200) Genome browser AA seq 556 aa AA seqDB search MWRYFSVLLAIWSSAGQAICPVWSPTQAEQEIARLSAQIARWDKAYWQQGTSDVNDEVYD QLAARLKQWRHCFGDEQAADVPVAAGGSVRHPVGHTGVAKIADKTALRQWMQSRRDLWIQ PKVDGVAVTLVYRQGQLVQATSRGDGLKGEDWTEKVKRIASVPGQVKGPLANSVLQGELF LLRDNHIQKQMGGMNARAKVAGTMMRHDSGAGLDNIGIFIWAWPDGPASMPERLQALTQA GFTLTGSWTHKVSSLEAVEKIRERWFTSPLPFVTDGVIIRSAQEPPGHRWLPGEGSWVVA WKYASVARVAEVRAINFTVGRTGRIAVVALLEPVQLDDKQVQRVNLGSVGRWQALDIAPG DQIQISLAGQGIPRVDNVVWRGSDRRKPVPPETRFTPLTCFYATPECHGQFMARLKWLSS SSVLNIAGLGEAGWQTLHQAHHFEHLFSWLALTQEQLQHTPGITSERGLRLWHQFNLVRR QPFTRWLDALGVPLPRRALRALSDRQWQQLLERDALRWHQVPGIGPEKARRLVDFVHHST VNALASWLGEQGVQGF NT seq 1671 nt NT seq  +upstreamnt  +downstreamnt atgtggcgatattttagcgtgctgttagcaatctggagcagtgccggtcaggcgatatgc ccggtctggtcgcctacccaggcagagcaggagatagccaggctcagcgcgcaaatagca cgctgggataaggcgtactggcaacagggcaccagcgacgtcaacgacgaagtctatgac cagctggcggcaaggctaaaacagtggcggcactgctttggcgatgaacaggcggcggac gtaccggtggctgcgggtggttcggtcaggcacccggtcggccacactggagtcgcgaag atagccgataaaacagcgctccggcagtggatgcagtcgcgtcgcgatctgtggatccag ccaaaagtggatggcgtggcggtcacgctggtctaccgtcagggtcaactggtgcaggcc accagccgcggggacgggctgaaaggcgaagactggacggagaaagtcaaacgcatcgcc tcggttcccgggcaggtaaaaggcccgcttgccaatagcgtgttgcagggggagctcttt ttactgcgcgataaccatatccagaagcagatgggtgggatgaatgcgcgggcaaaagtc gccgggacgatgatgcgacacgattccggcgcagggctggataacatcggtattttcatc tgggcatggcctgacggccccgcctcgatgcctgaacggctacaggccttaacccaggca ggcttcaccctgaccgggtcatggacgcataaagtcagttcgctggaggcggtagaaaaa atacgcgaacgctggtttacatcgcccctgccgtttgtgaccgatggggtcatcatccgc tcggcgcaggagcctccgggtcaccgctggcttcccggcgagggcagttgggtcgtggcg tggaaatatgcgtcggtcgcccgggttgccgaagttcgggccatcaatttcaccgtgggg cgtaccggcaggatcgcggtggttgccctcctggagcccgtacagcttgatgataagcag gtgcagcgcgtaaacctcgggtcagtgggacgctggcaggcgctggatattgcgccgggg gatcagatccaaattagcctggccgggcaggggatcccgcgagtggataacgttgtctgg cgggggagcgatcgccgcaaacctgtgccgccagaaacgcgtttcaccccgctcacctgt ttttatgccacgccggagtgccacgggcagtttatggcccggctgaagtggctgagttcg tcgtcggtgttaaatatcgccgggctgggtgaggctggctggcagacgctgcatcaggcg caccactttgaacatctcttttcctggctggcgctcactcaggagcaattgcaacacaca cccggcataacgtcagagcggggcctgcggctctggcatcaattcaatctggttcgccgt cagccttttacccgctggctggatgcgcttggcgttcccctgccacgaagggccctgcgc gcgcttagcgatcggcagtggcagcagttactggagagagatgcgttacgctggcatcag gtgccgggcatcggcccggaaaaggcgcgcaggctggtggattttgttcatcattccacc gttaacgccctggcttcctggctgggtgagcagggcgtacagggcttttag

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