Laceyella sacchari: C1X05_00285
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Entry
C1X05_00285 CDS
T05304
Name
(GenBank) DNA-binding response regulator
KO
K18344
two-component system, OmpR family, response regulator VanR
Organism
lfb
Laceyella sacchari
Pathway
lfb01502
Vancomycin resistance
lfb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lfb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C1X05_00285
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
C1X05_00285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lfb02022
]
C1X05_00285
01504 Antimicrobial resistance genes [BR:
lfb01504
]
C1X05_00285
Two-component system [BR:
lfb02022
]
OmpR family
VanS-VanR (VanB type vancomycin resistance)
C1X05_00285
Antimicrobial resistance genes [BR:
lfb01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
C1X05_00285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
AUS07449
LinkDB
All DBs
Position
complement(54263..54925)
Genome browser
AA seq
220 aa
AA seq
DB search
MSYSILVIEDDLDIQELIQEFLRSQAYEVTVASDGLEGIRIFREKPVDLVILDVMLPQLD
GHSVCKMIRDQSNVPIIMLTALGEETDQLKGFELGVDDYVSKPFSFNVLIKRVEAVLRRT
HRTEPSQRLSYNGLVLDTEGHTVTVGSKKPDLTAKEFDILHALLRNRGKVLSRDMLLNQV
WGIDFYGDPRVVDTHIKNLRKKLGSSYIQTVKGIGYKIGD
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtcttattcgatcttggttattgaagatgaccttgacattcaagagctgatccaagag
tttctgcgctcgcaggcgtacgaagtcactgtggccagcgacgggctagaaggcattcgc
atatttcgagaaaagccagtcgacttggtgatcctagacgtgatgttaccccagctggac
gggcacagcgtttgcaagatgattcgcgaccaatccaatgtgcccatcatcatgctcacc
gcgctgggagaggaaacagatcaactcaaaggctttgagttgggtgtcgatgattatgtc
agcaaaccgttttcgtttaatgtgcttatcaagcgcgtagaagccgtgttgcgccgcacc
caccggaccgaaccatcccagcggctcagttataacggcttggtgttggacactgaaggg
catacggtgacggtgggctcaaagaagcccgatttgacggccaaggaatttgacatattg
cacgcgctattgcgcaaccggggcaaagtgttaagccgcgacatgttgttaaaccaagtg
tggggaattgatttttacggcgatccccgcgtagtcgacacacacatcaagaatctccgc
aaaaaattggggagttcgtacattcagacggtaaaggggattggttataaaattggtgac
taa
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