Leptospirillum ferrooxidans: LFE_0006
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Entry
LFE_0006 CDS
T01809
Name
(GenBank) putative radical SAM family protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
lfc
Leptospirillum ferrooxidans
Pathway
lfc00790
Folate biosynthesis
lfc01100
Metabolic pathways
Module
lfc_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
LFE_0006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfc03016
]
LFE_0006
Enzymes [BR:
lfc01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
LFE_0006
Transfer RNA biogenesis [BR:
lfc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LFE_0006
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
BAM05737
UniProt:
I0IKD8
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All DBs
Position
8467..9105
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AA seq
212 aa
AA seq
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MKITELFRSIQGESLYSGWPCFFIRTSGCPLRCTWCDTTYSFYGGTDMTVDEILLETGKS
ETNLVEITGGEPFVQTDFVELSNRLRREGYEVLIETSGGFPIPEGLDRSCHVIMDIKPPG
SGMSQWMNPDHFRSLTSNDEIKAVCQSREDFDWVVSTLDDWRLPAEIPVTVSPVFDLVDP
KELGQWVLESRRRFRIQIQLHKILFDPKAKGV
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
ttgaagattaccgagctgtttcgttcgattcagggggaatcgctttattcgggttggccc
tgttttttcatcaggacttctggttgtccccttcgttgtacatggtgtgatacgacctat
tcattttatggtggaacggacatgactgtggacgagatccttcttgagacggggaagtcg
gaaacaaatctggtcgagattaccgggggggagccgtttgtccagacggattttgtggag
ctttcgaaccgtctccgacgggaaggatatgaggttttgattgaaacttcgggaggattt
cccattcccgaggggctcgacaggtcctgtcatgtgattatggacatcaagccacccggg
tccgggatgagccagtggatgaatcccgatcatttccggagcctgacatcgaatgacgag
atcaaggcggtgtgccagagtcgggaggatttcgactgggttgtatcgactcttgacgat
tggcgattgcctgccgagattcctgtgaccgtttctccggttttcgatctggttgatcca
aaagagcttgggcaatgggtgcttgaatccagaagacgtttcagaatacagatacagctt
cataaaattctgtttgatccaaaggcgaagggggtctga
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