Limosilactobacillus fermentum F-6: LBFF_1619 Help Entry LBFF_1619         CDS       T02669                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism lff  Limosilactobacillus fermentum F-6 Pathway lff03030   DNA replication lff03410   Base excision repair lff03420   Nucleotide excision repair lff03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lff00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     LBFF_1619    03410 Base excision repair     LBFF_1619    03420 Nucleotide excision repair     LBFF_1619    03430 Mismatch repair     LBFF_1619  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lff03032]     LBFF_1619    03400 DNA repair and recombination proteins [BR:lff03400]     LBFF_1619 Enzymes [BR:lff01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      LBFF_1619 DNA replication proteins [BR:lff03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      LBFF_1619 DNA repair and recombination proteins [BR:lff03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      LBFF_1619    NER (nucleotide excision repair)     GGR (global genome repair) factors      LBFF_1619    MMR (mismatch excision repair)     DNA ligase      LBFF_1619   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       LBFF_1619 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT Nlig-Ia Hydrolase_6 AAA_lid_10 DUF3783 Motif Other DBs NCBI-ProteinID:  AGL89509 LinkDB All DBs Position complement(1638097..1640136) Genome browser AA seq 679 aa AA seqDB search MSKQEAVSELTKQQAQAELTPLREQLKKWGAEYYEQDNPSVEDYVYDRAYQRLVEIEQRF PDLVVPDSPTQRVGGAAESQLNKVTHEIPMLSMGDVFSLAELADFNRRQQDNSDVKVDFD YNLELKIDGLSLSLVYENGRLVQGSTRGNGTIGEDVTENVKTIKSIPQVLPEPLSLEFRG ECYMPKEAFVKLNERREAEGQPVFANPRNAAAGSLRQLDPKVTAARQLDTFMYYVPDYQA LGVTTQAQALEKMRALGFAVNPNYRVVHSQAELTAYIEEYTKKRDQLPYGIDGIVEKVND LATQVALGNTVKVPRWEIAYKFPPEEQATVVRDIEWTVGRTGNVTPTAVMDPVQLAGTTV SRASLHNPDYLVEKDIRLGDTVLLHKAGDIIPEISRVIIEKRPADSKPYEVPTTCPECGA DLVHLDDEVALRCVNPMCPAQIKEGLAHFASRNAMNIDGLGPKIIEQLWDKGMVKDVADL YRLEAAQLLTLPKFGEKSISNLLTAIANSRHNSCERLLFGLGIRHVGAKVAQLLAAEFKS VDALMAADAATISAVDSIGPIIGDAVATYFQNEQVHQLIAELKEVGVNMDYLAPTTSATE SAEWAGKRVVLTGKLTKMTRGQAQEWLSARGASVTGSVSKKTDLLIAGEKAGSKLEKAQT LGIEVWDEDRFDQAMKEEN NT seq 2040 nt NT seq  +upstreamnt  +downstreamnt atgagtaagcaagaagccgtaagtgagctaaccaagcaacaggctcaagcggagttaacg cctttaagagagcagctcaagaagtggggagcggagtattacgaacaggacaacccgagc gtggaggattacgtttacgaccgggcttaccaacgcctagtggaaatcgagcaacgcttc ccggacttggtggtacctgattcaccaacgcaacgggtagggggggccgcggaaagccaa ctcaacaaggtgacccacgagatcccgatgctttcgatgggggacgtcttctcgctcgca gaattggcggactttaaccgccgccaacaagacaacagtgacgtcaaagttgattttgac tacaacctggaacttaagatcgacgggttatcgttatcgttagtctacgaaaatggccgt ttggtgcagggttcgacccgggggaacgggacgatcggtgaagacgtgaccgaaaacgtt aagacgattaagtccatcccgcaggtcctgcccgaacccctctcgctagaatttcgtggc gagtgctatatgcccaaggaggccttcgttaagctcaatgaacgccgtgaagcggaggga cagccggtctttgccaacccgcgtaacgccgccgccggttccctgcgccagctagatccg aaggtgacggccgcccgccagttggatacctttatgtactacgtgcccgactaccaagca ctaggggtgaccacccaggcgcaagcgctcgaaaagatgcgggcgctgggctttgccgtc aaccccaactaccgggttgttcacagccaagcagaactgaccgcctacattgaggagtac actaaaaaacgggatcagctcccctacggaattgacgggatcgtcgaaaaggttaacgac ctagcaacgcaggtggcgctggggaatacggttaaggtaccgcgctgggaaattgcctac aagttcccaccggaggaacaggcgaccgtcgttagggacattgagtggactgtggggcgg accggtaacgtcacccctaccgccgtaatggatccggtacagctggcgggaacgaccgta tcccgggcctccttacacaatcccgattaccttgtcgaaaaagacattcgcctgggcgat accgtcttgttacacaaggccggtgatatcatcccggaaatttcccgggtaataattgag aagcgcccggctgatagtaagccctacgaagtgccgaccacctgtccggagtgcggggcc gacctagtgcacctcgatgacgaagtggcgctgcgctgcgttaacccaatgtgtccggcc caaattaaggagggcctggcccactttgcctctcgcaacgccatgaacatcgacgggttg gggcctaagataattgaacaactctgggataaggggatggttaaagacgttgccgacctt taccgcctggaagccgcgcaattgttaactttgcctaaatttggcgagaaatcgatcagc aacctattgacagccattgctaatagtcgtcataattcatgcgaacgccttttgtttggc ttagggattcggcacgtgggcgccaaggtcgcccagctactagccgccgaatttaagtcg gtggacgccctgatggcagctgacgccgcaacaatttcggcggttgattcgatcggccca atcatcggtgacgcggtggcgacctactttcaaaacgaacaggtccaccagttgattgcc gaactaaaagaggttggcgtcaacatggactacctggcccccaccaccagcgcaacggaa agtgccgagtgggccggaaaacgggtggtcctaaccggaaaactaaccaagatgacccgc ggccaagcccaggagtggctgagtgcccggggcgcttcggtaaccgggagcgtttctaag aaaacggatctcttaattgccggtgaaaaggccggtagcaaactggaaaaggcgcaaacg cttggcatcgaggtctgggatgaagaccgctttgaccaagcgatgaaggaggaaaactag

DBGET integrated database retrieval system