Limibacterium fermenti: ABNK31_08150
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Entry
ABNK31_08150 CDS
T10860
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lfg Limibacterium fermenti
Pathway
lfg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABNK31_08150 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfg03400
]
ABNK31_08150 (nth)
Enzymes [BR:
lfg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABNK31_08150 (nth)
DNA repair and recombination proteins [BR:
lfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABNK31_08150 (nth)
Prokaryotic type
ABNK31_08150 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
DUF2400
HHH_5
Ogg-HhH
RecR_HhH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
XGS84865
LinkDB
All DBs
Position
complement(1804714..1805364)
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AA seq
216 aa
AA seq
DB search
MTKKERYKHVIEWFAANAPSAETELHYNNPYQLLVAVILSAQCTDKRVNMVTPALYEAFP
SPEVMAASSPDEVFTYIKSCSYPNNKAKNLVKMAQKLVTDFNSQVPSDIDTLLTIPGVGR
KTANVMLAVAFDKPAMPVDTHVFRVANRIGLTNNSKTPLETERELVKHIPRDLLSKAHHW
LILHGRYICVARKPKCEICGLRPWCKYYEKNSLPPQ
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaggaacgttataaacacgtcatcgagtggtttgccgccaatgcgccttcg
gcagagaccgaacttcattacaacaatccgtatcaactgcttgtcgccgttatcttatcg
gcccaatgcaccgataaacgggtgaatatggtcactccggctctttacgaagcctttccc
tcgccggaagtcatggcggcgtcctcacccgatgaggtgtttacgtatatcaaatcgtgc
tcttatccgaataacaaagccaagaacctggtgaaaatggctcaaaaactggtaaccgat
ttcaacagccaggttccttcggatatcgataccttactaaccattcccggcgtggggagg
aaaaccgccaatgtgatgctggccgttgccttcgacaagccggccatgcccgtcgatacg
catgtcttccgcgtagccaaccgcatcggactgaccaacaactccaaaacgcccctcgaa
accgagcgcgaactggtcaaacatattcccagggatttattatcgaaagcgcatcactgg
cttattcttcacggacggtatatttgcgtagcccgtaaaccgaaatgcgagatatgcgga
ctcaggccttggtgcaagtattacgagaaaaacagcctaccgcctcaatag
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