Limibacterium fermenti: ABNK31_12315
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Entry
ABNK31_12315 CDS
T10860
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
lfg Limibacterium fermenti
Pathway
lfg00300
Lysine biosynthesis
lfg00550
Peptidoglycan biosynthesis
lfg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABNK31_12315
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABNK31_12315
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lfg01011
]
ABNK31_12315
Enzymes [BR:
lfg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ABNK31_12315
Peptidoglycan biosynthesis and degradation proteins [BR:
lfg01011
]
Precursor biosynthesis
Amino acid ligase
ABNK31_12315
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
XGS82332
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All DBs
Position
complement(2832005..2833468)
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AA seq
487 aa
AA seq
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MKAKKLIQKCKVIDIHGDVDIDIKGITSDSRQVKPGFLFIAVEGICTDGHAYIGKAIEQE
ATLIVYDKPMIEEYFSKATYVRVENSAVALAQIAAAWYGNPSKHLTLVGVTGTNGKTTVA
TLLYNMVRAMGHSAGLLSTVANYVNDERYPTTHTTLDPILLNEFLRKMVDAGCEYAFMEV
SSHAIHQKRVYGLHFEGGIFTNLTQDHLDYHKNMLEYRNVKKSFFDDLPASSFALSNYDD
KNGSVMLQNTKAEQYFYSLKTVVDFKGRIVEKHFDGTYIEFSNKPLVVQFVGVFNVYNLL
AVYAGALLLGFDRDEVLRVLTLLKPVAGRFQTIRSPRNITAIVDYAHTPDALTNVLNAIH
EVLNKRGQVITVVGCGGNRDKTKRPIMAREAVRLSDRVVFTSDNPRFEDPQEILNDMLNG
LTEEEKSAVISILDRREAIKTAYALAKPGDVILIAGKGHEDYQEIKGVKHHFDDKEVVDE
LMNKLAN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaaaaacttattcaaaaatgcaaggtcatagacattcatggggatgtcgat
atcgatataaaaggaatcacttccgattcccgccaggtgaaacccgggtttttatttatt
gccgtcgaaggcatttgtaccgacgggcatgcctacatcggtaaggctatcgagcaggaa
gccacactaattgtgtacgacaagccgatgatcgaagaatatttttccaaagccacgtat
gtgcgcgtcgagaacagcgccgtcgcgttagcgcaaattgccgccgcttggtacggcaat
ccttccaagcatttaacgctcgtaggggtaacgggcacaaacggaaaaacgaccgtcgcc
accttattatataatatggttcgtgcgatgggccattcggcaggactgctttcaactgtg
gccaattatgtaaacgacgaacgttatccgaccacccacacgacgctcgatccgatctta
ttgaatgagtttctccgtaaaatggtcgatgccggatgcgaatacgcctttatggaagtg
agttcccatgccatccatcaaaaacgcgtctacggattgcattttgagggcggaatattt
acgaacctcacccaggatcatttggattatcacaagaatatgctggagtaccggaatgtg
aaaaaatcgtttttcgatgacttgccggcttcgtcgttcgcgcttagcaattacgatgat
aagaacggaagcgtgatgttgcaaaatacaaaagccgaacaatatttctattcgctaaaa
acggtagtcgattttaagggacgcatcgttgaaaagcatttcgacggcacgtatatcgag
tttagtaataaacccctggtggtgcaatttgtaggagtattcaatgtgtataacctgctg
gcggtgtatgccggagcgttattgctgggattcgatcgcgacgaagtgttgcgtgtcctg
acgttgttaaagcccgtggcgggacgctttcaaaccattcgttcgccgcgtaatatcacc
gctattgtcgattacgcgcatacgcccgacgctttgaccaatgtcttgaatgccattcac
gaggtgttgaacaaaagagggcaggtgattaccgttgtcggctgcgggggcaaccgcgat
aaaaccaagcgtcccattatggcgcgcgaagcggtgaggttaagcgaccgcgtggtgttt
acttccgataatccgaggttcgaagatccgcaagagattctgaatgatatgctcaacggg
ctcaccgaagaggaaaagtcggccgtgatttccattttagaccgtcgtgaagcgataaag
acggcttatgctttggccaaacccggcgatgtgattttgattgccggaaaagggcatgag
gattatcaggaaataaagggggtaaaacatcatttcgatgataaggaagttgttgatgaa
ttgatgaataaattagcaaattag
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