Companilactobacillus farciminis: LF20184_12280
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Entry
LF20184_12280 CDS
T06098
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm00300
Lysine biosynthesis
lfm00550
Peptidoglycan biosynthesis
lfm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LF20184_12280
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LF20184_12280
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lfm01011
]
LF20184_12280
Enzymes [BR:
lfm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LF20184_12280
Peptidoglycan biosynthesis and degradation proteins [BR:
lfm01011
]
Precursor biosynthesis
Amino acid ligase
LF20184_12280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ATO47482
LinkDB
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Position
complement(2516349..2517878)
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AA seq
509 aa
AA seq
DB search
MSLKISKAIEILKKHDLLVSSSVSDDNLEVTNISYNSKEDQTNGIFFCKGNNFKAEYLDQ
AIKNGAKIYVSEKEYSKDIDRLIVKSASKALALLSSEYFGNPQNDLFIVAFTGTKGKTTT
SYFTYDILKNAYPKQVGLFSTVDRIVGPDPKDEFKSDLTTPESLDLFHDMRTCVDNGIKY
LVMEVSSQAYKKNRVYGLKFDIGGFLNITPDHIGPNEHPTYADYLNCKKQLMINSKVNII
NRQTNDYDTVYAAAKQTSDDKDIYRFAKNEVGDTDFSIRNKESNLNDSVFTYTAESDKAE
DLQEHGEYTYQLGLVGDFNELNAGAAITAAKIIGVDNEVIADSLKKAFVPGRMEHINTKS
HGTIFVDYAHNYASMNALLSFLKREYPGSAIKVVVGSPGDKGVSRRAGFAQVLTESADEA
ILTTDDPGFEDPAAICKEIDEKIDHTKVKVKTILDRPSAIKDMIEHSSGDDIVVLAAKGN
DAYQKTKGVDVPYPSDPVVAKKILKDIEG
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaaaataagtaaagctatagagattttgaagaaacatgatttactggtttct
agttcagttagtgacgataaccttgaggtaactaatattagttacaattctaaagaagac
caaactaatgggatcttcttctgcaagggaaataatttcaaggctgaatacttagatcaa
gccattaaaaatggtgccaaaatttatgtttcagaaaaagagtacagcaaggatattgat
cgtctaatcgtaaagagtgcttcaaaggctttggctcttttgagttcagagtactttggc
aatcctcaaaatgatctctttatcgttgccttcacaggaactaaaggtaagacaacaaca
tcatactttacatatgatattttgaagaatgcttatcctaagcaagttggtctattctca
accgttgaccgtatcgtgggaccagatccaaaagatgaattcaagtcagatttaacgaca
ccagaatcattggatcttttccatgacatgagaacttgtgttgacaacggtattaaatac
ctggttatggaagtatcgtctcaagcatataagaagaatcgagtttatggattgaaattc
gatatcggtggatttttgaatatcactcccgaccatatcggacctaatgaacatccaact
tacgctgattatttgaattgcaagaagcaattgatgatcaactccaaggtaaatattatt
aatcgtcaaacaaacgactacgatacagtttatgcggctgctaaacaaactagtgacgac
aaagatatttatcgctttgctaaaaatgaagttggcgacactgacttcagtattcgcaac
aaagagtccaatttgaatgattcagttttcacttatactgccgaaagcgacaaagctgaa
gacttgcaagaacatggtgaatatacttatcaactaggacttgttggtgatttcaacgaa
ttgaatgcaggagctgctattacggctgcaaaaattattggcgttgacaatgaggtgatc
gccgatagtctaaaaaaagcattcgtcccggggagaatggagcacattaataccaagtct
cacgggaccatctttgtagattatgcacacaactacgctagtatgaatgctctgttgagc
ttcttaaaacgtgagtatcctggttcagcaattaaagtcgttgttggaagccctggtgat
aaaggagtttctagaagagctggctttgcacaagttttaactgaatcagctgatgaagca
attttaacgacagatgaccctggatttgaggatccagccgccatttgtaaagaaatcgat
gaaaaaatcgaccatactaaggtcaaagttaagacaatcttggatcgtcctagcgctatt
aaagatatgatcgaacatagttctggcgatgatattgttgttttggctgctaagggaaac
gatgcttatcaaaagacaaaaggtgtcgatgtaccttatccaagcgatccagtagtcgct
aagaaaattttgaaggacattgagggttaa
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