Limosilactobacillus frumenti: LF145_00970
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Entry
LF145_00970 CDS
T06870
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lfn
Limosilactobacillus frumenti
Pathway
lfn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LF145_00970 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfn03400
]
LF145_00970 (nth)
Enzymes [BR:
lfn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LF145_00970 (nth)
DNA repair and recombination proteins [BR:
lfn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LF145_00970 (nth)
Prokaryotic type
LF145_00970 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QFG72037
LinkDB
All DBs
Position
complement(226782..227438)
Genome browser
AA seq
218 aa
AA seq
DB search
MLSDQETRDAIKVMREHFPEASTTLDGDTVFHFLLATILSAQSTDHAVNQVTPALFDRFP
TPQSLAAVEPSDVEPFIQRLGLYHNKAKFLVNCSREIVTRFNGKVPHTLKELTSLSGVGR
KVADVVLAECFNIPAFPVDTHVNRVAHRLAMVSPKASRLQVEKRLMQAVPKEHWLDAHHS
MIFWGRYQCTARHPQCAACPLLKICQYGQSITQSPDHY
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgctaagtgatcaagaaacacgagatgcaattaaggtcatgcgggaacactttccagaa
gcttcgacgaccctagacggcgatacggtcttccacttcttgctggctactattcttagt
gcccagtcgaccgaccacgccgttaaccaagtgacaccagctctctttgatcgttttcca
actccccaatcgctagccgcagttgaacctagtgacgttgagccctttatccagcgccta
gggttataccataacaaagctaagttcctcgtgaattgttctcgtgaaattgtaactcgt
tttaatggaaaagtgccacatacgctaaaggagcttaccagtctctcaggggttggtcgt
aaagtagctgatgtcgtattagcagaatgttttaacatccccgcctttccagttgatacc
cacgttaaccgtgtggcccatcgtctagcaatggtatctccaaaagctagtcgccttcag
gttgagaaacgcttaatgcaagctgtcccaaaagaacattggctagatgcccatcacagt
atgatcttttggggacgctatcaatgtaccgctcgtcacccccagtgcgctgcttgccca
ttgttaaaaatctgtcaatatggacaaagtatcactcagtcccctgatcactactaa
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