Leptospirillum ferriphilum YSK: Y981_00030
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Entry
Y981_00030 CDS
T03197
Name
(GenBank) radical SAM family protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
lfp
Leptospirillum ferriphilum YSK
Pathway
lfp00790
Folate biosynthesis
lfp01100
Metabolic pathways
Module
lfp_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
lfp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Y981_00030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfp03016
]
Y981_00030
Enzymes [BR:
lfp01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Y981_00030
Transfer RNA biogenesis [BR:
lfp03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Y981_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AIA29799
UniProt:
A0A059XMR8
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All DBs
Position
8455..9093
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AA seq
212 aa
AA seq
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MKITETFRSIQGESRYSGWPCFFIRTTGCPLRCRWCDTTYSFYGGEERTVDSLVGEAVSS
GTSLVEITGGEPFVQPELPELCQKLLDLGKTVLIETSGGFPVPSGLNRECRLIVDLKPPG
SGMEAWMKAENFAELGTEDEIKAVLTGREDFDWSVQKLEEWGIWGRVPVTFSPVFGECDP
RELARWVLDSGLPVRVQIQLHKILFDPQLRGV
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcaccgaaacattccgttccatccagggagagtcccgctattccggatggccc
tgttttttcatccggacgactggttgtcctcttcggtgccgctggtgcgataccacgtat
tctttttatgggggagaggagcgaacggtggattctctcgtcggggaagctgtttcttcc
ggaacgtccctcgttgaaattaccggcggggaaccctttgttcaaccggaacttcccgag
ctttgtcaaaaacttcttgacctcgggaaaaccgtgctgattgaaacgtcgggaggtttt
ccggttccctccggtctgaaccgggagtgtcggctgattgtcgacctcaaacctcctggt
tccgggatggaagcctggatgaaggcggagaactttgcggagctcgggacggaggacgaa
atcaaggcggttctcacgggccgggaagattttgactggtccgtccaaaagctggaagag
tgggggatatggggtcgtgtgccggtgacgttttcgccggtgttcggggaatgtgacccc
cgggaactggcccggtgggtcctggactccggcctccctgtccgggtccagatccagttg
cacaagattctgttcgacccccagctgaggggagtttaa
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