Limosilactobacillus fermentum CECT 5716: LC40_0407
Help
Entry
LC40_0407 CDS
T01958
Name
(GenBank) Putative uncharacterized protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Pathway
lfr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LC40_0407
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lfr01007
]
LC40_0407
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfr03016
]
LC40_0407
Enzymes [BR:
lfr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
LC40_0407
Amino acid related enzymes [BR:
lfr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
LC40_0407
Transfer RNA biogenesis [BR:
lfr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LC40_0407
Prokaryotic type
Other AARSs
LC40_0407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1f
tRNA-synt_1e
tRNA-synt_1b
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
ADJ41030
LinkDB
All DBs
Position
684935..687727
Genome browser
AA seq
930 aa
AA seq
DB search
MRVKDTLNLGKTKFPMRGRLPETEAQREALWEENKVYEQRQKLNEGKPSFVLHDGPPYAN
GPIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHGLPIEHQLTKAGYDRKKMSLTEF
RDLCQKYALEQVEIQKKGFKRLGVAGEWDHPYLTLAKEFEAAQIKVFGAFAKRGLLYQAK
KPVYWSWSSESALAEAEVEYHDVVAKTAFFTEQVQDGKGLLDSDTYLVGWTTTPWTIPAS
EAVAVSADFEYALVQPSGSDRKYVVAASLLGDLAQKFNWTDYQVVKTFKGAEMEGMTTKH
PYIDRELLVGLADYVTDDAGTGLVHTAPGYGDDDYNFGKKYNLPIFAPMNDQGVLTAENG
PEFDGVFYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPIVFRATDQWFVSIDKM
RDEILKAVDEVTYYPTWGKVRLRNMLKDRGDWVISRQRVWGVPLPIFYAEDGTPIMTEET
INHVSDLFREYGSNVWFDREAKDLLPAGFTSEHSPNGKFTKETDIMDVWFDSGSSHQGVL
AERDYLTYPADMYLEGSDQYRGWFNSSLITSVVVSGHAPYKSVLSQGFTLDQSGKKMSKS
LGNVIDPNKVVKQMGAEIIRLWVMSADTSADVRVSMETLQQIAESYRKLRNTFRFLLANT
SDFGPENFVAYEKREAVDQYMTVNFNRFLAGMRDEFDRYDFLNAYKHLINFVNNDLSSFY
MNVAKDVLYIEPEDSHVRRSMQATFYEILSGLTKLLTPILPHTTEEVWSYMDEPEDFVQL
TEIPEARTFENGNALLEKWEGFMELRSHVLKCLEEARNAKLIGRSLEASADLYLTASQQE
LLADLGTDAGLLCGVSALSVHDASEAPAEAESFSDNAAVLVQAAKGEVCDRCRMTKEDVG
SDPAYPQLCARCAKLVRENFPQTVEEGLEK
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttaaagacaccttaaaccttggtaagaccaagttcccaatgcggggacggctc
ccggaaacggaagcgcagcgagaagcgctgtgggaagaaaacaaggtttatgaacaacga
caaaagttaaacgagggcaagccaagctttgtgcttcacgatggccctccatacgccaac
gggccaattcacattggtcatgctatgaacaagatttccaaggacttcatcgttcgctac
aagtcgatgaccggctaccgggctccgtacgttcccggttgggacacccacgggttgccg
attgaacaccaactgactaaggctggctacgaccgcaagaagatgagcttaactgagttc
cgggacctgtgtcaaaagtacgccttggagcaagtcgaaattcaaaagaagggctttaag
cgcctcggggttgccggggagtgggatcacccatacctgaccctggccaaggaatttgaa
gcggcccagatcaaggtctttggtgcctttgctaagcggggactcttgtaccaagctaag
aagccggtttactggtcttggtcttccgaatccgccctggccgaggccgaagttgaatat
cacgatgtcgttgcgaagaccgcctttttcaccgaacaggttcaggatggcaagggactg
ctcgattccgatacttacctggtgggctggacaacgacgccatggacgatcccggcctct
gaagcggttgccgtcagcgctgacttcgaatacgccctggttcaaccgagcggcagtgac
cgtaagtacgtggtcgcagctagcctgctgggcgatttagcccagaagtttaactggacc
gactaccaggtggtcaagacctttaagggtgccgaaatggaagggatgaccaccaagcac
ccatacattgaccgtgagttgttagttggcctggctgattacgtcactgatgacgccggg
actgggttggtccacaccgcacctggttacggggatgatgactacaacttcgggaagaag
tacaacctgccgatctttgccccaatgaatgaccaaggggtactaaccgccgaaaacggg
ccggaatttgacggggtcttctaccaagacgccgatgatatttccctgcgcctgttagag
gaacacgacgccctgcttttagaagaagacttagagcactcctacccgtttgactggcgg
accaaaaagccgatcgtcttccgggcgaccgatcagtggtttgtctccatcgacaagatg
cgcgacgaaatcttaaaggccgttgacgaagtgacctactacccgacttgggggaaggtc
cgcttgcggaacatgttaaaggaccgtggtgactgggtaatctcccgtcaacgggtctgg
ggggttccgttgccgatcttctacgccgaagatggcacgccaatcatgaccgaagaaacg
atcaaccacgtttccgacctctttcgggaatacggctccaacgtctggttcgatcgggaa
gccaaggacctcttgccagcgggcttcacctctgaacactccccgaacggcaagttcacc
aaggaaaccgacatcatggacgtctggtttgactccggctcgtcgcaccaaggggtgtta
gccgaacgcgattacctgacttacccggcggacatgtacttggaaggttccgaccagtac
cggggttggtttaactctagtttgatcacctcggtggtcgtttctgggcacgccccgtac
aagtccgtcctctcccaagggtttaccttggaccagagcggtaagaagatgtccaagtcc
ttagggaacgtgattgacccgaacaaggtggttaagcaaatgggggccgaaatcatccgc
ctttgggtaatgtcggccgacacctccgccgacgtgcgggtgtcaatggaaaccctgcaa
caaatcgccgaatcctaccggaagttgcggaacaccttccgcttccttttggcgaacacc
agcgactttggaccggagaactttgttgcctacgaaaagcgcgaagccgttgatcagtac
atgacggttaacttcaatcgcttcctggccgggatgcgtgatgagttcgatcgttacgac
ttcttaaacgcctacaagcacttgattaactttgtcaacaacgacctgtcatccttctac
atgaacgtggccaaggacgtcttgtacatcgaaccggaagactcccacgttcgccgctcg
atgcaagcgaccttctacgaaattcttagcggcctgaccaagctgttgacgccgatcttg
ccgcacacaaccgaagaagtgtggtcctacatggatgaaccggaagacttcgttcagtta
acggaaattccggaagcccggacgtttgaaaatggcaacgccctgcttgaaaagtgggaa
ggcttcatggaattacgttcccacgtccttaagtgcttggaagaagcccgtaacgctaag
ttgattggtcggtcacttgaagcgagcgccgacctgtacctgacggcttcccaacaagaa
ttactagctgacctcgggaccgatgcgggactcttgtgtggggtttcagcgctgagcgtt
cacgacgctagcgaggcaccagcagaagccgaaagcttcagtgataacgcggccgtctta
gttcaagcggccaagggtgaagtgtgtgatcgttgccggatgaccaaggaagacgttggc
tccgatccggcctacccgcaactctgtgcccgctgtgctaagttagtacgggaaaacttc
ccccaaacggttgaagaaggcttagaaaagtag
DBGET
integrated database retrieval system
