KEGG   Limosilactobacillus fermentum CECT 5716: LC40_0788
Entry
LC40_0788         CDS       T01958                                 
Name
(GenBank) Putative uncharacterized protein
  KO
K19119  CRISPR-associated protein Cas5d
Organism
lfr  Limosilactobacillus fermentum CECT 5716
Brite
KEGG Orthology (KO) [BR:lfr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lfr02048]
    LC40_0788
Prokaryotic defense system [BR:lfr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    LC40_0788
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: ADJ41389
LinkDB
Position
complement(1399727..1400539)
AA seq 270 aa
MINSRNLIYTNILDLTEXJXXISNEFXRHSTTXCFQVDGDFALFTDPITKIGGEKFTYPV
PTYQALKGIAESIYWKPTFQIVIDKVRIMKPIITEARDIRLMKYNRTGASDLARYTYLRD
VSYQVQAHLEWNEQRVDLMKDRNANKHYAIMKRSIARGGRRDIFLGTRECQGFVEECRFG
QGSGYYDDSDDRLFGTMLHGFDYPDETGEDYLGLRLWNVVMKKGIIEFPPPTDLQLHRRK
LHELEAKKFTLDDIQSVDDTYEELLGGEDE
NT seq 813 nt   +upstreamnt  +downstreamnt
atgataaattcgcggaatttaatttacaccaacattttggacttgaccgaawwywtakaa
wkcatcagcaatgagtttawacgacatagtactacatwttgttttcaagtagatggagac
tttgccttgtttacggatccgattaccaaaattggtggtgagaagttcacctatccggtg
ccaacttatcaagcattgaaagggattgccgaaagtatctactggaagccaacctttcag
attgtaatagataaggttcgaatcatgaaaccgattattactgaagcaagggatatccgc
ttaatgaagtacaacaggactggcgcaagtgatcttgctcggtatacctatttaagagat
gtttcatatcaggttcaagcccacctagaatggaatgaacagcgagtagatttgatgaaa
gatcggaatgccaataagcattatgccattatgaaacggtcaatagcgcggggcggaaga
cgtgatatttttcttggaacccgcgagtgtcaaggctttgttgaggaatgtcgatttggg
caggggtcaggatactatgatgactctgatgatcgtttgtttggaaccatgctacacggc
tttgactatccagatgaaactggggaagattacctaggtttgcggctatggaatgtggtg
atgaaaaaaggaattattgaattcccgccaccaaccgatctacaattacacagaagaaaa
ctacatgagctagaggcaaagaaatttacactggatgatatccaaagtgttgatgacact
tatgaagaattattagggggtgaggatgaatga

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