Limnospira fusiformis: HFV01_01955
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Entry
HFV01_01955 CDS
T06534
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lfs
Limnospira fusiformis
Pathway
lfs01501
beta-Lactam resistance
lfs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HFV01_01955
01503 Cationic antimicrobial peptide (CAMP) resistance
HFV01_01955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lfs02000
]
HFV01_01955
01504 Antimicrobial resistance genes [BR:
lfs01504
]
HFV01_01955
Transporters [BR:
lfs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HFV01_01955
Antimicrobial resistance genes [BR:
lfs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HFV01_01955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
LacI
Col_cuticle_N
Motif
Other DBs
NCBI-ProteinID:
QJB24785
LinkDB
All DBs
Position
378524..381679
Genome browser
AA seq
1051 aa
AA seq
DB search
MAKNSFNLSEWSIRQPVPTLVLFLILTLVGVMSFFQLGIDDTPNIDIPAVTVTVTQPGAG
PNELENQVTKPVEDAIAGLGNIDQLTSTVRDGVSTTTVSFVLGTDSDRATNDVRNAIAQI
RQSLPQDINDPIVQRLRFAGGSIMTYAVTSPTRSVEELSDLVDRNISRALLNVPGVAQIQ
RIGGVDREICIELHPDRIQGLGLTTTQVNDQIRAFNINLPGGRSQVGGSEKSIRTLGSAQ
TVEALRDYPIILPNGNSVPLSSIGTVTDGLAEVRQVAKFADFPLDSNSQMGTPVVAFSVL
RSTGSTLVSVEQGIRNRVVDLQKTLPEDINLELIVTRANSIRESYQASVDALVIGSILTV
VVVGIFLRNWRPTLITAIALPLSILPTFLVMRLFDYTLNGMTLLALALAMGNLVDDAICM
MENIDQHVEMGKPPFKAAIDASREIGLAVVATTATIVAVFLPVAFMGGVPGQFFQPFGVT
VATSTMFSTLVACTMTPLLGARLLQQKSTPPKTDTNHTRRRFSPYRSLLGWSLRHRITTL
LLAIAFFVASLQLVPLIPRGLFNSGDTGLSTISLELPPGSTLAELQTTTQEAIALLAENP
AVDNVLAVLGNRGEGVVEVNRATLSVNLVPSDERDLSQAEFEAQMRTRFTQIPGARISFQ
SQGAGGGGKDLSIVLSGDNPDSLLETANALERQMRSIPGLVEVTSSASLVRPEILIRPDP
RRAGDLGVSVQAIARTALLATLGDNQSNLAKFDLPDRQIPIRVQLAEEFRNNFDAIENLR
IPTQDGRLVPLSAVADITIGSGPATIDRYFRSRQVQLEANLEGLSLGDALAQVQALPAMN
PLPPDVQQQSEGDARIMIDVFTRFLSALGLAVLGIYAILVLLYNNFIIPVTILMALPLSL
GGALLALMITQKELGLFALIGIVLLMGLVTKNAILLVDCSMANQQMGMSRFNAVLEAGCS
RLRPILMTTFSTIAGMLPIALEWGAGSQVRSPMAIAVIGGMTTSTLLTLIVVPVWFTYVD
GFQNWLKNPFKPKRRRVSPPKRIPKNMASIK
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaatagttttaatctttccgaatggtcgattcgacaacctgttcccactttg
gtgctgtttttgattctgactctggtgggggtgatgtctttttttcaactgggaattgat
gatactcctaatatagatattccggctgttacggtgacagttacacaaccgggagcgggt
cctaatgaattggaaaatcaggtaactaaaccggtagaagatgcgatcgccggattagga
aatattgaccaacttacctctaccgtcagagacggagtatctaccactacggtgagtttt
gttttgggaaccgatagcgatcgcgctactaatgatgtccgtaatgcgatcgcccaaatt
cgccaaagcctaccccaagatattaacgaccccattgtacagcgtctccgatttgcgggc
gggtcgattatgacctacgcagtaacatcacccactcgctcagtagaagaacttagcgat
cttgtcgatcgcaacattagccgcgctttacttaacgttcccggtgtcgcccaaattcag
cgaatcggaggagttgaccgagaaatttgcatcgaacttcaccccgatcgcattcagggt
ctgggccttaccactacccaagttaacgaccaaattcgtgcctttaatattaaccttccc
ggagggcgatcgcaagtaggcggtagtgaaaaaagtatccgcaccctcggaagcgcccaa
accgtcgaagcattaagagactatccaattatactccccaatggtaactcagttcccctg
tccagtattggcacggttaccgatggtttagcagaagtccgccaagtcgccaaatttgct
gactttcccctcgactctaacagtcaaatgggtactcccgtcgtcgccttttctgtcctc
cgtagtaccggaagcaccctagtatctgtagaacaaggtattcgcaatcgggtggtagac
ctacaaaagacactcccagaagacattaacctagaactaattgttaccagggctaactct
attcgcgagtcctatcaagcctcagtggatgctttagttatcggttccattttaaccgtt
gtggtggtcggtatatttttgcgaaactggcgacccactttaattaccgcgatcgcctta
cctttatcgattttacccaccttcctggtgatgcgcctgttcgattataccctcaatggg
atgactctattagccctagctttagccatgggaaacctagtagatgatgctatctgtatg
atggaaaatatagatcagcacgttgagatgggtaaacctccttttaaagctgctattgat
gcttcccgcgaaattggattagccgtagtcgctaccaccgccaccattgtcgctgtcttc
cttccggtcgcttttatgggaggagttcccggtcagtttttccaaccctttggggtcaca
gtcgccacctctaccatgttttctaccctggtcgcctgtaccatgactcccctattgggc
gctaggttacttcaacaaaaatcaacacctcccaaaactgacactaatcacacccggcgg
cgcttctctccctatcgcagccttttgggttggtctttgcgacaccgcatcactacccta
ttattagcgatcgccttttttgtcgcgagtttacaattagttcccctcatccccagaggc
ttatttaatagtggagatactggattaagtaccatttccctggaattaccacccggttct
actttagctgaattgcaaactaccacccaggaagcgatcgcactcttagccgaaaatccc
gccgttgacaacgttttagcagtcttgggaaatcgtggggaaggtgtcgtagaagttaac
cgagctaccctgtctgtaaatttagtcccctccgatgaacgggacctatcccaggcggaa
tttgaagcacaaatgcgaacccgttttactcaaattcctggcgcgagaattagctttcag
tcccaaggtgcaggtggcggcgggaaagatttatctattgttctgagtggtgataacccc
gattctttgttagaaactgctaatgctttggaaagacaaatgcggtcaattcccggactc
gtagaagttacctctagcgctagtttggtcagacccgaaatcttgattcgtcctgaccct
agaagggctggagatttgggcgtttctgtacaggcgatcgctcgtaccgctttattagct
accttgggtgataatcagtccaatttggctaagtttgacttacccgatcgccaaattcct
atccgagtacaattggctgaggagtttcgcaacaattttgatgcgatcgaaaatttacgc
atacctacccaggatggtcgattagttcccctctctgcggtcgctgatattactatcggt
agcggtcccgctactattgaccgctatttccgttcccgacaagtacaattggaggctaat
ttagaaggtctttccttgggtgatgctctcgcacaggtacaggctttaccagctatgaac
cctctaccgcctgatgtacaacagcagtccgaaggtgatgctagaattatgattgatgtc
ttcacccgctttctctccgctttgggtttagctgtcttggggatttatgccatcctcgta
ttgctttacaacaactttattatccccgttaccattttgatggctttacctctgtccctc
ggcggcgcattactagccttgatgattactcaaaaagagttgggcttatttgctctcatc
ggtattgtcttgttgatgggtttggtaactaaaaatgccatccttttggtcgattgttct
atggctaatcaacagatgggaatgtctcgatttaatgcagtcctagaagctggctgctcc
cgactgagacctattttgatgaccactttttctaccatcgctggtatgttacctattgct
ttggaatggggcgcaggttctcaggtacgcagtcctatggcgatcgctgttattggtgga
atgactacatctaccctcttaactttgattgtcgttcccgtctggtttacctatgttgat
ggtttccaaaactggctgaaaaatccttttaaacccaaacggcggcgcgtatcacctcct
aaaagaatccctaaaaatatggcttctattaaatga
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