Limnospira fusiformis: HFV01_17770
Help
Entry
HFV01_17770 CDS
T06534
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lfs
Limnospira fusiformis
Pathway
lfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HFV01_17770 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfs03400
]
HFV01_17770 (nth)
Enzymes [BR:
lfs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HFV01_17770 (nth)
DNA repair and recombination proteins [BR:
lfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HFV01_17770 (nth)
Prokaryotic type
HFV01_17770 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
ArenaCapSnatch
Motif
Other DBs
NCBI-ProteinID:
QJB27290
LinkDB
All DBs
Position
3675002..3675655
Genome browser
AA seq
217 aa
AA seq
DB search
MSSHQHHKLRHRALEVLVRLKRLYPDAACTLNYETPLQLLVATILSAQCTDERVNQVTPA
LFKRFPDAFSLATADLQELETLVRSTGFYRNKARHIKESSRMIAEKFGGEVPKRMEQLLE
LPGVARKTANVVMANAYGINMGVTVDTHVRRLSQRLGLTQHKDPVRIERDLMQVLPQPDW
ENWSIRLIYHGRGICTARNPACYNCKLSDLCPSAQIG
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccaccaacaccataaactccgacatcgcgccctagaagttcttgtgcgtctc
aagcgtttatatcctgatgccgcttgtactctcaactatgagacacctttacagctattg
gtagccactatcctctcagcacaatgtactgatgaacgggttaatcaggtgacaccagct
ttatttaagcgctttcctgatgctttctctttggcgaccgcggatttgcaagagctggaa
actttggtgcgatcgactggattttatcgcaacaaggctcgccatatcaaagaatcaagc
cggatgattgctgagaaattcggcggggaagttcctaaacgcatggaacaattgctcgaa
ttacccggagtagcccgtaaaaccgctaatgtggtcatggctaatgcttacgggattaat
atgggcgtgactgttgatacccatgtgcgtcgtctcagtcaacggctgggattgactcag
cataaagaccccgttcgcattgagcgggatttgatgcaggttctacctcagccagattgg
gaaaattggtcaatccgattgatttatcatgggcgtgggatctgtacagcccgcaatccg
gcgtgttacaattgcaaattgtcagatttatgcccatcagcacagatcggctag
DBGET
integrated database retrieval system
