Limnospira fusiformis: HFV01_19265
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Entry
HFV01_19265 CDS
T06534
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lfs
Limnospira fusiformis
Pathway
lfs01501
beta-Lactam resistance
lfs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HFV01_19265
01503 Cationic antimicrobial peptide (CAMP) resistance
HFV01_19265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lfs02000
]
HFV01_19265
01504 Antimicrobial resistance genes [BR:
lfs01504
]
HFV01_19265
Transporters [BR:
lfs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HFV01_19265
Antimicrobial resistance genes [BR:
lfs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HFV01_19265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
RNA_pol_Rpb1_6
Motif
Other DBs
NCBI-ProteinID:
QJB27535
LinkDB
All DBs
Position
3991899..3995222
Genome browser
AA seq
1107 aa
AA seq
DB search
MLLFVSTFIKRPVLTTVCSILIVLVGVISIPLLPISQLPQLANTQINVTAVNIGADAETT
ETTVTSILEREINGVDNMRYISSNTANNGVSNVSVAFPVNVDRDIAQVNVNNRVSQAASS
LPDVVQQVGITVEASSPSILLVLGFYSDTDQNNQPIYDDVFISNFLDLNVLDEITRAPGV
GSVTILGERRYAMRIWLNPQKIAARGLVAQDVVAALRQQNIQVGAGKIGQAPTPPEQRFE
IPLRAQGRLRDVSEFEQLVVGVGNDGTLIKITDVGRVELGAQDYNLDATYNNQAAVGMAV
YQRPGSNALETAEAVKSKMQELSASFPPGVRYAIPYDTTLFVQASLQEVVITLLQTITLV
ILVIFVFLQDWRTTLIPTIAIPVALIGSMAGLKAMGFELNTLTLFGCTLAAGLVVDDAIV
IVEAVSSKIAQGMKPRQAALDAMEELTGATISTSLVLLAVFIPVAFFPGTTGIIFQQFSL
TITFAIICSTFNALSFSPTMAGVLLRPAKKTKGPLGWFFEKFNQGFGFIQNQYAKLIRFL
VRINTLVMGIFVGGLVLTVLMYGWVPTGFVPQEDQGFFLVILQGPDGVSLNYTANAAEEI
TDLILEEPEVESVFAAAGFGFDGLNPSQGVMFVQLKPWSERPTPEQSVYGVLGRINRALR
GVTAVQAFAVNAAPVPGMGSTGGVEIQIQDRSGNLPISALVDNGNRLLAQLNSDKYPAVG
RAFSQFSASKGQKNIQVLRDRALALNVNISDVFSTLQIYFGSLYVNDFVLGQRQYRVVAQ
AESEFRADPSDIGRLSVRSLDGNLIPLENLVKFEEIVGPEIITRFNLYRSMRIQADPAPG
FSSGQVIAAIEQAAAETLDPSFGYAWQGSALEEKAAGGAAIVIFGLGFVIAFLVLSAQYE
SYIDPLIIMLAVPLAVLGALAAIWFRSNVLMAGGIWPVVNNDVYAQVALVMLIGLASKNS
ILIVEFANQLRDKGLNIQKAAALAAEQRFRPIQMTAISSLVGFWPLVIASGAGASSRWSL
GTAIFGGMLVGTLLSLLITPNLYIAIKTLEARFLKGEKPQPSDSSGSNGSGPNGSGSNGS
GSNGSQTNGHQQHQPQSQPLDHTLTEN
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgctgttatttgttagcaccttcatcaagcgccccgttctcactacagtttgctccatt
ctcattgtattggtaggggtgatatctattcccctgctacctatttctcaactaccacaa
ctggctaacactcaaatcaacgtaactgcagtcaatattggtgctgatgccgaaaccaca
gaaaccactgtgactagcatcttagagcgggaaatcaacggcgttgataacatgagatat
atctcatcaaacaccgctaataatggggtttctaatgtctctgtagccttccctgtcaac
gttgatcgagatattgcccaggttaacgttaacaatagagtatctcaggcagcatcaagt
ttacctgatgtcgttcaacaggtcggtatcaccgtagaagcatcttcacccagtatcctg
ttggtactgggattttattcagatactgatcaaaataaccagcctatttatgacgatgtt
tttatcagtaacttcctagatttaaatgttcttgatgaaattacccgcgctcctggcgtg
gggagtgtaaccattttgggggaacgtagatatgccatgcgtatttggctaaatccccaa
aaaatcgcagctaggggattagttgctcaagatgtagtcgccgccttacgacagcaaaat
attcaggtcggcgctggtaaaattggtcaggctcccacccccccggagcaaagatttgag
atccccttgcgcgctcagggtcgccttcgagatgtctccgaatttgagcaattggtggtt
ggtgtcggaaacgatggcactctgattaaaattacagatgtgggtcgggtagagttaggc
gcacaggactataaccttgacgcaacctataacaatcaagccgccgtggggatggctgtt
taccaaagacccggtagtaatgccttggaaacagccgaggcggtcaagtcaaagatgcaa
gagttgagtgcatctttccctccaggggttagatatgccattccctatgatacaactcta
tttgtgcaagcctccctacaggaagtggtgatcaccctcctgcaaactattaccctggta
attttggtaatttttgtgtttttgcaggattggcgcacaaccctgattcctactattgct
atcccagtggcactcattggctcaatggcaggtctaaaggcgatggggtttgaactcaat
accctcacactgtttggttgtacattggcggcgggtttggtcgttgatgatgcgatcgtc
attgtggaagcagtttctagtaaaattgctcaggggatgaagccacgacaagccgcctta
gacgcaatggaagaactcactggcgctaccatatccacttccttagtattgctggctgta
tttattcccgttgcctttttccccggaactactggaatcatctttcagcagttctccctc
accattacttttgcgattatctgttccacatttaacgccctcagcttctctccgactatg
gctggggtgctattgcgtccggctaagaaaactaagggacctttaggatggttttttgag
aaatttaaccaaggttttggcttcatacaaaatcaatatgccaagttgattcggtttctg
gtgcggattaataccctggtgatggggatttttgtcggtggtttggtgctgactgtcctt
atgtatggctgggtacctactggatttgttccccaagaagaccaaggcttctttttggta
attctacagggtcctgatggcgtatcccttaactacaccgctaatgctgctgaggaaatt
actgatctgatcttagaagaaccagaagttgaatcagtattcgcggcggcggggtttggt
tttgatggtcttaatccatcccagggggtgatgtttgttcagctaaagccttggagtgaa
agacccaccccggaacagtccgtttatggggttctcggtcgcattaatcgagctttgaga
ggggttacagcagtacaggcttttgcggttaatgccgctccggttcctggtatgggtagc
actgggggggtggaaatccaaattcaagaccgcagtggtaatttgccgatttctgctttg
gtagacaatggtaatcgcttactggctcagttgaactctgataaatatccggctgtgggt
agggcttttagccagttttctgcatctaagggtcagaaaaatatccaggtattacgcgat
cgcgctctggctctcaatgtcaatatcagtgatgtttttagcaccctacagatttatttt
ggctccctatatgtcaatgattttgtcctcggacaacgacaataccgggttgtggctcaa
gcagaatccgagtttagggctgatccttctgatatcggccgcctatcagtgcgatcgctt
gatgggaacttaattcctttggaaaacttggttaagtttgaagaaatagtcgggccggaa
attatcacccgctttaatctttatcgatctatgagaattcaggctgaccccgctccgggt
ttcagttctggacaggtcattgcagctattgaacaagccgccgccgagacccttgaccca
tctttcggctatgcttggcaaggaagcgctttagaggaaaaagctgctggcggtgcggcg
atcgtcatcttcggactcggatttgtcattgcctttttagtcctttccgcacaatatgaa
agctacatcgaccccctcattattatgttagccgtccctctcgctgttttgggcgctttg
gctgctatttggttccgttctaatgtcttgatggctggcggcatttggcctgtagttaac
aatgatgtttatgctcaggtcgctctcgtcatgttgattggtttggcttctaaaaactcc
attctcattgtcgagtttgctaaccaactacgagacaagggacttaatattcagaaagca
gcagcactagccgcagagcaacgcttccgacctattcagatgaccgcgatctcttctttg
gtcggattctggcctctggtaattgcttccggtgccggtgcgtctagtcgttggtctttg
ggaactgctatctttggcggaatgttagtcggaactctattgagtctcttgattactcct
aacctctatattgctattaaaacccttgaggctcgtttcctcaaaggtgaaaagcctcaa
ccttctgatagttctggctctaatggttctggacctaatgggtctggctctaatggttct
ggctctaatggttctcagaccaatggacatcaacaacaccaaccacaaagtcaaccctta
gatcatacccttaccgaaaattag
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