KEGG   Lactobacillus gasseri ATCC 33323: LGAS_1026
Entry
LGAS_1026         CDS       T00410                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
lga  Lactobacillus gasseri ATCC 33323
Pathway
lga03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LGAS_1026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lga03400]
    LGAS_1026
Enzymes [BR:lga01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LGAS_1026
DNA repair and recombination proteins [BR:lga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LGAS_1026
 Prokaryotic type
     LGAS_1026
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 RecR_HhH DUF4294 Transposase_20 Q_salvage
Other DBs
NCBI-ProteinID: ABJ60401
UniProt: A0A806A6R7
LinkDB
Position
complement(1028669..1029298)
AA seq 209 aa
MEKLLSDEKARLVLKRILSLYPDAKGELHWDTKFHLLCAVLMSAQTTDKMVNKTTPKFFS
DYPDSASLAQASIKDIEAHIHTIGLYRTKAKHLKETAQIITDKFNGEIPKDKKTLMTLPG
VGEKTANVVLAEGFKIPAIAVDTHVSRISKRFKIVGEKATPHEVEQRLEELLPKEEWIRT
HHAMILFGRYTMPARTKDQDPYSFLPPLK
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaaaaattattgtcagacgaaaaagctcgattagttttaaaaagaattttgtctctt
tatccggatgcaaaaggagaacttcactgggatacaaagtttcatttgctttgtgcggtt
ttaatgagtgcacaaactactgataagatggttaataaaacaacacctaaattttttagt
gactatcctgatagtgctagtttagcccaagctagtattaaagatatcgaagcacatatt
cacacgattggtttgtatcgtacaaaggctaagcatttaaaggaaacagcacagattatt
acagataagtttaatggtgaaattcccaaggataaaaagactttaatgacactaccagga
gtaggtgagaaaacggctaatgttgttttggcagaaggttttaaaatacctgcaattgca
gttgatactcatgtatctcggatttctaaaagatttaaaatagtgggagaaaaagctact
ccgcatgaggtagaacaacgtcttgaagagttactgccaaaagaagaatggattcgtaca
catcatgcaatgattttatttggtcgatatacaatgccagctagaactaaagatcaagat
ccttattcttttttaccacctttaaagtga

DBGET integrated database retrieval system