Leopardus geoffroyi (Geoffroy's cat): 123589054
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Entry
123589054 CDS
T10761
Symbol
NTHL1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123589054 (NTHL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgf03400
]
123589054 (NTHL1)
Enzymes [BR:
lgf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
123589054 (NTHL1)
DNA repair and recombination proteins [BR:
lgf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
123589054 (NTHL1)
Prokaryotic type
123589054 (NTHL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
123589054
NCBI-ProteinID:
XP_045316610
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All DBs
Position
E3:40209130..40214677
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AA seq
326 aa
AA seq
DB search
MRGRASRNVVTGAAGKCSPQDSSMNATGVRMVTRSRSRGPGAGPRGGGEKAAPLWRGEAA
AEGRKSPSPSRHRRKTQKLNVAYDREEEDTKPPRAPSWEPRDWRQQLLNIRAMRSGKDAP
VDWLGVEHCYDSDAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDD
STLGTLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPDSVAELVALPGVGPKMAHLAMAVA
WGTVSGIGSCGARSTDCWWASASRLVCPSTHAARAASTGRCARPRGASEDHGASALDAVL
GSALRAFAGEPQPVCNKAWELFAVGV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggcgagcgtcacgtaacgtggtcacgggggccgccgggaagtgtagtccgcag
gactcaagcatgaacgcgacgggcgtgaggatggtgacccggagccgcagccggggcccg
ggggccgggccgcgggggggtggggagaaggccgcgccgctctggaggggagaggcggct
gcagaaggaaggaagagccccagcccttcgaggcatcggcggaagacacaaaaactgaat
gtggcctacgatcgcgaggaagaagacaccaaaccccccagggcaccaagctgggagccc
cgggactggcggcagcagctgctgaacatccgcgccatgaggagcgggaaggacgcacct
gtggactggctgggggttgagcactgctacgactccgacgcacccccaaaggtgcggagg
taccaggtgctgctgtcgctgatgctctccagccaaaccaaagaccaggtgacagcgggt
gccatgcagcggctgcgggctcggggcctgacagtggacagcatcctgcagacggatgac
agcacgctgggcacgctcatctaccccgtcggcttctggaggagcaaggtaaagtacatc
aagcagactagtgccatcctgcagcagcgctatggcggggacatcccagattctgtggca
gagctcgtggcactgccaggcgttggacccaagatggcacacttggccatggcggtggcc
tggggcaccgtgtcaggcatcgggagctgtggggcgagatcaacggactgttggtgggct
tcggccagcagacttgtctgcccgtccacccacgctgccagggctgcctcaaccggacgc
tgtgcccggccgcgcggggcctctgaggaccatggtgcttcggccctggacgccgttctg
ggtagtgcgctgcgtgcctttgctggggagccccagcctgtttgtaataaagcttgggag
ttgtttgcagttggggtctga
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