KEGG   Leopardus geoffroyi (Geoffroy's cat): 123590427
Entry
123590427         CDS       T10761                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC3-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03250  Viral life cycle - HIV-1
lgf05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    123590427
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    123590427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgf03019]
    123590427
Messenger RNA biogenesis [BR:lgf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123590427
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 AID MafB19-deam Spectrin_Anc-1
Other DBs
NCBI-GeneID: 123590427
NCBI-ProteinID: XP_045319564
LinkDB
Position
B4:133114709..133132698
AA seq 469 aa
MSCDDFEYCWDNFVDHKGMCFQRRNLLKDYDFLAAELQEILRNPMDRIHPSTFRFHFPNL
VYASGRKLCYLCFQVEGDYFSYNDSDRGVFRNKVHPWARCHAEQCFLSWFRDQYPYRDEC
YNVTWFLSWSPCPTCAQEVVEFLEEYRNLTLSIFTSRLYYFWDPNYQEGLCKLWDAGVQL
DIMSCDDFEYCWDNFVYHKGMRFQRRNLLKDYDFLSAELQEILRPGQQRKRDWPFPPRPG
AQVDPRSWVQEVTEPGINTRRHSLHLLVSFLLPRPTMNPLQEVIFCRQFGNQHRVPKPYY
RRKTYLCYQLKLPEGTLIDKGCLRNKKKRHAEMCFIDKIKSLMLDTSQRVEIICYITWSP
CPFCAEELVAFVKDNPHLSLRIFASRLYVHWRWKYQQGLRHLHASGIPVAVMSLPEFEDC
WRNFVDHQDRSFQPWHNLDQYSKSIKRRLGKILTPLNDLRNDFRNLKLE
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgtcctgtgatgattttgaatactgttgggacaactttgtggaccacaagggaatgtgc
ttccagagacggaatctgttaaaagattatgatttcctggctgcagagcttcaggaaatc
cttagaaacccaatggacaggatacatcctagcaccttccgtttccactttccaaacctg
gtctatgcttctgggcggaaactctgttatctgtgcttccaagtggagggagactacttc
tcgtataatgacagcgaccggggagtttttcggaacaaggtccatccctgggctcgatgc
catgcagaacagtgcttcctctcttggttccgtgaccagtatccataccgtgatgaatgt
tacaatgtcacctggttcttatcctggagcccctgccccacctgtgcacaggaggtggtc
gagttcctggaggagtacaggaacttgacgctgagcatcttcacctcccgcctctactac
ttctgggacccaaattaccaggaggggctttgcaagctatgggacgcaggggtccagctg
gacatcatgtcctgtgatgattttgaatactgttgggacaactttgtgtaccacaaggga
atgcgcttccagagacggaatctgttaaaagattatgatttcctgtctgcagagcttcaa
gaaatccttaggcccggccaacaaagaaaaagagactggcccttccctccccgcccaggg
gcccaagtagacccaaggagttgggttcaggaggtgacagagcctgggataaacaccaga
agacactctctgcaccttttggtttccttcctcttgcccagacccacaatgaatccacta
caggaagtcatattctgccgtcagtttggcaaccagcaccgggtcccaaagccctactac
cggaggaaaacctacctgtgctaccagctgaagctgcccgaaggcaccctaattgacaaa
ggctgccttcgaaacaagaaaaagcgccatgcagaaatgtgctttattgacaagatcaag
tcactgatgctggacacatcccagagagtcgaaatcatctgctatatcacatggagcccc
tgccccttctgtgccgaggaactggttgcgtttgtcaaagacaacccccacctcagcctg
cggatctttgcctcccgcctgtacgtccactggcgctggaagtatcagcaggggctgaga
catctgcacgcatccgggatcccagtggctgtcatgagcctcccagagtttgaggactgc
tggaggaattttgtggaccaccaggacaggtcgttccagccctggcacaacctggaccaa
tacagcaaaagcataaaacgtaggctcgggaagatcctgacgcccctgaatgatttaagg
aatgacttcagaaatttgaaacttgaatga

DBGET integrated database retrieval system