Leopardus geoffroyi (Geoffroy's cat): 123593024
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Entry
123593024 CDS
T10761
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04360
Axon guidance
lgf05017
Spinocerebellar ataxia
lgf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
123593024 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
123593024 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
123593024 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgf04040
]
123593024 (TRPC3)
Ion channels [BR:
lgf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123593024 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
123593024
NCBI-ProteinID:
XP_045324488
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All DBs
Position
B1:102269703..102343952
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AA seq
941 aa
AA seq
DB search
MSTKVRKCKEQARVTFPAPEEEEEEEEEEGEDEGSEPQRRRRGWRGVNGGLEPRSAPSQR
EAHSYCPQRFSPRLDMSMEGSPSLRRKTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERF
LDAAEYGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIG
DALLLAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITP
IILAAHCQKYEVVHMLLMKGARIERPHDYFCKCGDCMEKQRHDSFSHSRSRINAYKGLAS
PAYLSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEV
EAILNGDLESAEPLEVHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLRE
QTIAIKCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFN
ASDRFEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPRE
YILQLWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFT
YARDKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVL
FIMVFLAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFI
ENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTL
PPPFSLVPSPKSFVYFVMRIINFSKCRRSRLQKDIEMGMGNSKSRFTKCFAVHLNLMQHC
ELNLFTQSNSRVFESHSFNSILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEI
KQDISSLRYELLEDKSQATEELAVLIHKLSEKLNPSMLRCE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaggaagtgcaaggagcaagcgagggtgaccttccccgcgccggag
gaggaggaagaggaggaggaggaggagggtgaggacgaaggctcggagccgcagcgccgc
cggcggggctggaggggcgtcaacggggggctggagccgcgctctgcgccctcacagcgg
gaagcgcacagctactgcccgcagcgcttctcccccaggctggacatgtccatggaggga
agcccatctctgaggcgcaagacagtgatgagggagaagggccggcgccaggccgtccgg
ggccccgctttcatgttcaatgaccggggtaccagcctcacagccgaggaagagcgcttc
ctcgacgctgccgagtacggcaacatccccgtggtgcgcaagatgctagaggagtccaag
acgttgaacgtcaactgcgtggactacatgggccagaacgcgctgcagctggccgtgggc
aacgagcacctggaggtgacagagctgctgctcaagaaggaaaacctggcacgaatcggc
gacgccctgctgcttgccatcagcaagggctacgtgcgcatcgtggaagctatcctcaac
caccccggcttcgcagccagcaagcgcctgaccctgagcccctgtgagcaggagctgcag
gacgacgacttctatgcttacgacgaggacggcacacgcttctctcccgacatcacgccc
atcatcctggcggcgcactgccagaagtacgaggtggtgcatatgctactgatgaagggt
gccaggatcgagcggccacacgactatttttgcaagtgcggagattgcatggagaagcag
aggcacgactctttcagccactcacgctcgaggatcaatgcctacaaggggctggccagc
ccagcgtacctgtccttgtctagcgaggacccagtgctcaccgccttggagctcagcaat
gagttggccaagctggccaacatagagaaggagttcaagaatgactaccggaagctctcc
atgcaatgtaaagactttgtagtgggtgtgctggatctttgccgagactcagaagaggta
gaagccattctgaatggagatctggaatcagcagagcccctagaggtacacaggcataaa
gcttcactgagtcgtgtcaaacttgctattaagtatgaagtcaaaaagtttgtggctcac
cccaactgccagcagcagctcttgacaatctggtatgagaacctctcaggtctgcgcgaa
cagaccatagctatcaagtgtctggttgtgctggtggtggccttgggccttccatttctt
gccatcggctactggattgcaccttgcagcaggctggggaaaattctgcgaagccctttc
atgaagtttgtggcacatgctgcttctttcatcatcttcctgggcctgctcgtgttcaat
gcctcagacaggttcgaaggcatcaccacgctgccaaacatcactgttattgactatccc
aagcagatcttcagggtgaaaaccacccagttcacttggactgagatgctaattatggtc
tgggttcttggaatgatgtggtctgagtgtaaggagctctggctggaaggacctagagaa
tatattttgcagttgtggaatgtgctggactttgggatgctttccatcttcattgctgct
ttcacagccagattcctagctttccttcaggcaacaaaagcacaacagtatgtggacagt
tatgtccaagagagtgacctcagtgaagttacacttccaccagagatacagtatttcact
tatgccagagataaatggctcccttctgaccctcagatcatatctgaaggcctctacgcc
attgctgttgtgctcagtttctctcggatcgcatatatcctccctgcaaatgagagcttt
ggccccttacagatctctcttggaaggactgtgaaggatatattcaagttcatggtcctc
tttattatggtgtttcttgcctttatgattggcatgttcatactttattcttactacctt
ggggctaaagtaaatgctgcttttaccactgtagaagaaagtttcaagacactgttttgg
tcaatatttgggttgtctgaagtcacttctgttgtgctcaaatacgatcacaaattcata
gagaatattggctacgttctgtatggaatatacaatgtaactatggtggtcgttttactc
aacatgttaattgctatgattaatagctcatatcaagaaattgaggatgacagtgacgta
gaatggaagtttgcccgttcaaaactttggttatcttattttgatgatggaaaaacatta
cctccacccttcagtctagttcctagtccaaagtcatttgtttatttcgtcatgaggatc
attaacttctccaaatgcagaaggagccggctacagaaggatatagaaatgggaatgggt
aactccaagtccaggtttacaaagtgctttgctgtacatttgaacctcatgcaacactgt
gagttaaacctcttcactcagtctaactcaagagtttttgaatcacacagttttaacagc
attctcaaccagccaacacgttatcagcagataatgaaaagacttataaagcgatatgtt
ctgaaagcacaagtggacaaggaaaatgatgaagttaatgaaggtgaattaaaagaaatc
aaacaagatatctccagccttcgttatgaacttttagaggacaagagccaagcaactgag
gaattagccgttctgattcataaactcagtgagaaactgaatcctagcatgctgagatgt
gaatga
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