Leopardus geoffroyi (Geoffroy's cat): 123594568
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Entry
123594568 CDS
T10761
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04360
Axon guidance
lgf04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
123594568 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
123594568 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lgf01009
]
123594568 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgf04040
]
123594568 (TRPC5)
Protein phosphatases and associated proteins [BR:
lgf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123594568 (TRPC5)
Ion channels [BR:
lgf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123594568 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
123594568
NCBI-ProteinID:
XP_045327330
LinkDB
All DBs
Position
X:complement(92395694..92663602)
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AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHSRRSFSASSTELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGPPLIRTMPRAGGAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSEPSSEPMCTISDGIAQQHYMWQDIRYSQMETGKAEACSQSEI
NLSEVELGEARGAAQSRECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgtactacaaaaaagtcaactactcaccttacagagaccgcatccccctg
caaatcgtgagggctgagacagagctctctgcagaagagaaggcgttcctcaatgctgtg
gagaagggggactatgccaccgtgaagcaggccctacaggaggctgagatctactacaat
gtcaacatcaactgcatggatcctctgggccggagcgccctgctcattgccattgagaat
gagaatttggagatcatggagctactgctgaaccacagcgtgtatgtaggcgatgcattg
ctctacgccatccgcaaggaggtggtgggcgctgtggagcttctgctcagctacaggcgg
cccagtggagagaagcaggttcccactctgatgatggatacccagttctctgagttcaca
ccggacatcactcccatcatgctggccgcccacaccaacaactatgaaatcatcaaattg
cttgttcaaaaacgggtcactatcccacggccccaccagatccgctgcaactgtgtcgag
tgtgtgtccagttcagaggtagacagtctgcgccactcccgctcccgtctgaacatctat
aaagcgctagcaagcccctcactcattgccttatcaagcgaggaccccatcctaactgcc
ttccgtctgggctgggagctcaaagagctcagcaaggtggagaatgagttcaaggccgag
tatgaggaactctcccagcagtgcaagctctttgccaaagacctgctggaccaagctcgg
agctcccgggaactggagatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcagaagtaccatgacctggccaagctgaaggtggcaatcaaataccaccagaaagag
tttgttgctcagcctaattgccaacagttacttgccactctgtggtatgacggcttccct
ggatggcgacggaaacactgggtagtcaagcttcttacctgcatgaccattggattcctc
tttcccatgctgtctatagcttatctgatctcacccaggagcaaccttgggctgttcatc
aagaaaccctttatcaagtttatctgccacacagcatcatatctgaccttcctcttcatg
cttctcctggcttctcagcacattgtcaggacagaccttcatgtacaggggcctccccca
acagtcgtggaatggatgatattgccttgggttctcggtttcatttggggggagattaag
gaaatgtgggatggtggatttactgaatacatccatgactggtggaacctgatggatttt
gcaatgaactcactctacctggcaaccatttccttgaagattgtggcctatgtaaagtat
aatggttctcgtccaagggaagaatgggaaatgtggcacccgactctgattgcggaagca
ctgtttgcaatatccaacattttaagttcgttgcgtctcatatccctgttcacagccaac
tcccacttggggcctctgcagatctctttagggcgcatgctgcttgatatcctcaaattc
ctctttatctactgcctggtactgctggcttttgccaacggactgaaccagctttacttt
tactatgagaccagagcgatcgatgaaccaaacaactgcaagggaatccgatgtgagaaa
cagaataatgccttctccacgctgtttgaaacccttcagtcgctcttctggtctgtattt
ggccttctaaatctctatgttaccaacgtgaaagccagacatgagttcacagagtttgtg
ggagctaccatgtttgggacatacaacgtcatctccctggtggtgctgctgaacatgctg
attgccatgatgaacaactcttaccagcttattgccgatcatgccgatattgagtggaaa
tttgcaaggacaaagctctggatgagttactttgatgaaggcggcaccttgccacctcct
ttcaatatcatccccagtcccaagtcatttctctaccttggtaactggttcaacaacacc
ttctgccccaaaagagaccctgatgggagacggaggaggcacaacttgagaagcttcaca
gaacgccatgctgacagcctgatacagaatcaacattaccaggaagttatcaggaattta
gtcaaaagatacgtggctgctatgataagaaattccaaaacgaacgagggactgacagaa
gaaaattttaaggaattaaagcaggacatctccagctttcgatatgaagtactcgacctc
ttaggaaataggaaacactcaaggagaagtttttccgcgagcagcaccgaactgtcccag
agggatgataccaatgatggcagtggtggggctcgggccaaatccaagagtgtctctttc
aatttaggctgcaagaaaaaggcctgccacgggccacctctcatcagaaccatgccaaga
gccggcggtgcccaagggaagtcaaaagccgagtcatcaagcaaacgctccttcatgggt
ccttctctcaagaaactcggcctcctattctccaagtttaacggtcatatgtctgaaccc
agttcagagccaatgtgcaccatttcggatggcatcgctcagcagcactatatgtggcag
gacatcaggtattctcagatggagaccgggaaagcagaggcctgctctcaaagtgaaatt
aacctcagtgaggtagaattaggggaagcccggggcgctgctcagagccgtgaatgccct
ctagcctgttccagctctctccactgtgcatccagcatctgttcctcgaattctaaactt
ttagactcctcagaggacgtctttgaaacttggggagaggcttgcgacctgctcatgcac
aaatggggtgacggacaggaagaacaagttacaactcggctctaa
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