Leopardus geoffroyi (Geoffroy's cat): 123597328
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Entry
123597328 CDS
T10761
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf01522
Endocrine resistance
lgf04110
Cell cycle
lgf04218
Cellular senescence
lgf04934
Cushing syndrome
lgf05160
Hepatitis C
lgf05161
Hepatitis B
lgf05163
Human cytomegalovirus infection
lgf05165
Human papillomavirus infection
lgf05166
Human T-cell leukemia virus 1 infection
lgf05167
Kaposi sarcoma-associated herpesvirus infection
lgf05169
Epstein-Barr virus infection
lgf05200
Pathways in cancer
lgf05203
Viral carcinogenesis
lgf05207
Chemical carcinogenesis - receptor activation
lgf05212
Pancreatic cancer
lgf05214
Glioma
lgf05215
Prostate cancer
lgf05218
Melanoma
lgf05219
Bladder cancer
lgf05220
Chronic myeloid leukemia
lgf05222
Small cell lung cancer
lgf05223
Non-small cell lung cancer
lgf05224
Breast cancer
lgf05225
Hepatocellular carcinoma
lgf05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
123597328 (RB1)
04218 Cellular senescence
123597328 (RB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123597328 (RB1)
05207 Chemical carcinogenesis - receptor activation
123597328 (RB1)
05203 Viral carcinogenesis
123597328 (RB1)
09162 Cancer: specific types
05212 Pancreatic cancer
123597328 (RB1)
05225 Hepatocellular carcinoma
123597328 (RB1)
05226 Gastric cancer
123597328 (RB1)
05214 Glioma
123597328 (RB1)
05220 Chronic myeloid leukemia
123597328 (RB1)
05218 Melanoma
123597328 (RB1)
05219 Bladder cancer
123597328 (RB1)
05215 Prostate cancer
123597328 (RB1)
05224 Breast cancer
123597328 (RB1)
05222 Small cell lung cancer
123597328 (RB1)
05223 Non-small cell lung cancer
123597328 (RB1)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
123597328 (RB1)
05161 Hepatitis B
123597328 (RB1)
05160 Hepatitis C
123597328 (RB1)
05163 Human cytomegalovirus infection
123597328 (RB1)
05167 Kaposi sarcoma-associated herpesvirus infection
123597328 (RB1)
05169 Epstein-Barr virus infection
123597328 (RB1)
05165 Human papillomavirus infection
123597328 (RB1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
123597328 (RB1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
123597328 (RB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lgf01009
]
123597328 (RB1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123597328 (RB1)
Protein phosphatases and associated proteins [BR:
lgf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123597328 (RB1)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
123597328 (RB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
123597328
NCBI-ProteinID:
XP_045331904
LinkDB
All DBs
Position
A1:complement(22813953..22993435)
Genome browser
AA seq
927 aa
AA seq
DB search
MPPKTLRRAAAAAAAAAAAEPPAPPPPPPEEDPEQDSGPEDLPLPRLVFEETEEPDFIAL
CQKLKIPDHVRERAWFTWEKVSSVDGVLEGYSQRRKELWGICIFIAAVDLDEMPFTFTEL
QKNIETSVYKFFDLLKEVDTSTKVDNAVSRLLNKYKVLCALYSKLERTCEHIYLTQPGSL
LSTEINSLLVLKASWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPALLKEPYK
TAVIPFNGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFKNFIPFM
NSLGIVASNGLPEVESLSKQYEEIYLKNKDLDARLFLDHDKTLQADPIDSFEMQRTPRKS
NSDEEVNTMLPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVK
DIGCIFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDN
IFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEA
NLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAKDREGPADHLESACTLSLPLQSNH
TAADMYLSPIRSPKKKGTTRVNSTANTEAQATSAFQTQKPLKSTSLSLFYKKVYRLAYLR
LNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKF
KIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSVFMQRLKTNILQYASTRPPTLSP
IPHIPRSPYKFSSSPLRIPGGNIYISPLKNPYKISEGVPTPTKMTPRSRILVSIGESFGT
SEKFQKINQMVCNSDRVLKRSAEGGNPPKPLKKLRFDIEGSDEADGSKHLPGESKFQQKL
AEMTSTRTRMQKQKMNDSMDTSNREEK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaaaaccctccggagagcagcagccgcagccgccgcggccgccgccgccgaa
cccccggcgccgccgccgccccctcctgaagaggaccccgagcaggacagcggccccgag
gacttgcctttgcccaggcttgtatttgaagaaactgaagaacctgattttattgcatta
tgtcagaaattaaagataccagatcatgtcagagaaagagcttggtttacttgggaaaaa
gtttcatctgtggatggagtgttggaaggttatagtcaaaggagaaaggaactatgggga
atctgtatctttattgcagcagttgacctagatgagatgccattcacctttactgagctg
cagaaaaacatagaaaccagtgtctacaaattctttgatttactaaaagaagttgataca
agtaccaaagttgataatgctgtgtcaagactgttgaataagtataaggtattgtgtgca
ctctacagcaaattggaaaggacatgtgaacatatatatttgacacaacctggcagtttg
ctatctactgaaataaactctctgttggtgctaaaagcttcttggatcacatttttacta
gctaaaggggaagtgttacaaatggaagatgatctcgtcatctcatttcagttaatgctc
tgtgtccttgattattttattaaactctcacctcctgcgttgcttaaagaaccatataaa
acagctgtaataccttttaatggttcacctcgaacaccaaggcgaggtcagaacaggagt
gcacggatagcaaaacaactagaaaatgatacaagaattattgaagttctctgtaaagaa
catgaatgtaatatagatgaggtgaaaaatgtttatttcaaaaatttcataccttttatg
aattctcttggaattgtagcttctaatggacttccagaggtggaaagtctctctaaacaa
tatgaagaaatttaccttaaaaacaaagatcttgatgcaagattatttctggatcatgat
aaaactcttcaggctgatcctatagacagttttgaaatgcagagaacaccacgaaaaagt
aactctgatgaagaggtgaatacgatgcttccgcagactccagttaggaccgttatgaat
actattcaacagttaatgatgatcttaaattcagcaagtgatcaaccatcagaaaatctg
atttcctattttaataactgcacagtgaatccaaaggaaagtatcctgaaaagagtgaag
gatattggatgcatctttaaagagaaatttgctaaagctgtgggacagggatgtatggaa
attggatcacagagatacaaacttggagtccgattatattaccgagtaatggaatctatg
cttaaatcagaagaagaacgattatccattcaaaattttagtaaactcctgaatgacaac
atctttcatatgtctttgttggcatgcgctcttgaggttgtaatggctacatatagcaga
agtacatctcagaatcttgatactggaacagatttgtccttcccatggattctgaatgta
cttaatttaaaagcctttgatttttacaaagtgattgaaagttttatcaaagcagaagcc
aacttgaccagagaaatgataaaacatttagagcgatgtgaacatcgaatcatggaatcc
cttgcatggctctctgattcacctttatttgatcttattaaacaagcaaaggaccgagaa
ggaccagctgatcaccttgaatctgcttgtactctcagccttcctctccagagtaatcac
actgcagcagatatgtatctttctccaatcagatccccaaagaaaaaaggaactacacgt
gtaaattctactgcaaacacagaggcacaagcaacctcagccttccagactcagaagcca
ttgaaatctacctccctttcacttttttacaaaaaagtgtaccgactggcctatcttcga
ctaaataccctgtgtgcacgccttctgtctgaccaccctgaactggaacacatcatctgg
accctttttcagcacacactgcaaaatgagtatgaactcatgagagacaggcatttggat
cagattatgatgtgttccatgtatggcatttgcaaagtgaagaatatagaccttaaattc
aaaatcattgtaacagcatacaaggatcttcctcatgctgttcaggagacattcaaacga
gttttgatcagagaagaggagtatgattccattatagtattctataactcagtcttcatg
cagagacttaaaacaaatattttgcagtatgcttctaccaggcccccgactttgtcacca
atacctcacattcctcgaagcccttacaagttttctagttcacctttacgaattcctggg
ggaaacatctatatatcacccctgaagaatccatataaaatttcagaaggtgtgccaaca
ccaacaaaaatgactccaagatcgagaatcttagtatcaattggtgaatcatttgggact
tctgagaagttccagaaaataaatcagatggtgtgtaacagcgaccgtgtgctcaaaaga
agtgctgaaggaggcaaccctcctaaaccgctgaaaaaactacgctttgatattgaagga
tcagatgaagcagacggaagtaaacatctcccaggggaatccaaatttcaacagaaactg
gcagaaatgacatctacccgaacacgaatgcagaagcaaaaaatgaacgatagcatggat
acctcaaacagggaagaaaaatga
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