Leopardus geoffroyi (Geoffroy's cat): 123600574
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Entry
123600574 CDS
T10761
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04022
cGMP-PKG signaling pathway
lgf04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
123600574 (TRPC6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
123600574 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgf04040
]
123600574 (TRPC6)
Ion channels [BR:
lgf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123600574 (TRPC6)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
123600574
NCBI-ProteinID:
XP_045338553
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Position
D1:complement(139454..277313)
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AA seq
932 aa
AA seq
DB search
MNRSPAFAPRRAGSPRRAAGVGARRQESRDYLLLDAGPGDGGGAQPPRPEPGYHRCGQDT
DNRLAHRRQTILREKGRRLANRGPAYMFNDRSTSLSIEEERFLDAAEYGNIPVVRKMLEE
CLSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAI
LSHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLR
KGARIERPHDYFCKCSECSQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALEL
SNELAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDIEVYHGGGDHS
RPNLSHLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPF
LALIYWFAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNETSTDN
AKQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTEGPKEYLFELWNMLDFGMLAIFAA
SFIARFMAFWHASKAQHIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLY
AIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYY
IGAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVL
LNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLR
LKKWISEMFQAHKKGFQEDAEMNKRNEEKKFGIWGSHEDLSKLSLDKKQLGHSKQSSIRS
SQDFQLNSFNNPPGKYQKIMKRLIKRYVLQAQIDRESDDVNEGELKEIKQDISSLRYELL
EEKTQNSEDLAELIRKLGEKLSTEPKQEEGNR
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggagccccgcgttcgcgccccggagggccgggtctccccggagggcggctggg
gtcggtgcacggcgccaggagagccgggactacctgctgctggacgcggggccgggggac
ggcggcggggctcagcccccgcggccggagccgggttaccaccgctgcggccaggacacc
gacaacagactggcccaccggcggcagacgattctccgtgagaaggggagaaggttagcc
aaccgaggaccagcttacatgtttaacgatcgctcaacaagcttatctattgaggaggaa
cgttttttagatgctgctgaatatggcaacatcccagtggtgaggaagatgttagaagaa
tgtctgtccctcaatgttaactgtgtggattacatgggccagaatgccctgcagttggcc
gtggccaacgagcatctggaaattacagaacttcttctcaagaaagaaaacctctctcgt
gttggggatgctttgcttctagctattagtaaaggttatgttcggatcgtggaagctatt
ctcagtcatccagcttttgctgaaggcaagaggttggcaaccagccccagccagtctgaa
ctgcagcaagatgatttttatgcctacgatgaagatggaacacggttctctcatgatgtg
actccaatcattctggccgcccactgccaggaatacgaaatcgtgcataccctcttgcgg
aagggtgctcggattgaacggcctcatgactatttctgcaagtgcagtgagtgcagccag
aaacagaagcacgactcctttagtcactccagatctaggattaatgcctacaagggcctg
gcaagtccagcttacctgtcactgtccagtgaagacccagtcatgacagctttagaactc
agcaatgagctggccgttctggccaacattgagaaggagttcaagaatgactacaaaaaa
ctgtcaatgcagtgcaaggattttgttgttggactccttgatctgtgcagaaataccgaa
gaagtggaggccattctgaatggggacatcgaagtgtatcacggtgggggagatcacagc
cgtccaaatctcagccacttgaaacttgccattaaatatgaagtaaaaaaatttgtagct
catccaaactgtcaacagcagcttctgtccatatggtatgagaacctctccggtctgcgg
cagcagaccatggcggttaagtttctcgtggtcctggcggttgctgtcggattgcccttc
ctggctctcatttactggtttgctccatgcagcaagatggggaagattatgcgcggaccg
ttcatgaagtttgtggcacacgctgcttccttcaccatttttctggggctgctggtgatg
aatgctgctgaccgatttgaaggcaccaaactccttcccaatgaaaccagcacagataat
gcaaaacagctcttcaggatgaaaacgtcctgcttctcatggatggagatgctcattata
tcctgggtcataggcatgatatgggccgaatgtaaagaaatttggacggaaggccccaag
gaatacttgtttgagttgtggaatatgcttgattttggtatgctggccatctttgctgca
tcattcattgcgagattcatggcattttggcatgcttccaaagcccaacacatcattgat
gcaaatgatactttgaaggacttgaccaaagtcacactgggagacaatgtgaagtattac
aatttggccaggataaagtgggacccctctgatcctcaaattatatctgaaggtctttat
gcaattgctgtagttctaagtttctcaagaatagcttatattttaccagccaatgaaagc
tttggacctctgcagatatcacttggaagaacagtgaaggacatcttcaagttcatggtc
atattcatcatggtgtttgtggcctttatgattggaatgttcaacctctactcctactac
attggtgcaaaacaaaatgaagctttcacaacagttgaggagagttttaagacactgttc
tgggctatatttggactttctgaagtgaagtcggtggtcatcaactataatcacaaattc
attgaaaatatcggttatgttctttatggagtctataatgtcacaatggtcattgttttg
ttaaatatgttaattgcaatgatcaacagttcattccaggaaattgaggacgatgctgat
gtcgagtggaaatttgcaagggccaaactttggttttcctactttgaagaggggagaaca
ttacctgttcccttcaacctggtgccaagtccaaagtccctgttttatctcttactgagg
cttaaaaaatggatttctgagatgttccaggcccataaaaaaggtttccaggaggatgca
gagatgaacaagagaaatgaagaaaagaaatttggaatttggggaagtcatgaagacctt
tcaaaattatcacttgacaaaaaacagcttgggcatagtaaacaatcaagtataaggagc
tcacaagatttccagttaaatagtttcaataatcctccaggaaagtatcagaaaattatg
aagaggctcattaaaagatacgtcttacaagcccagatagatcgggagagtgacgacgtg
aatgaaggggaactgaaggaaattaaacaggacatctcaagcctccgctatgagctcctt
gaagagaaaactcagaattcagaagacctcgcagaacttattagaaaacttggggagaaa
ttatcaacggaaccaaagcaagaggaaggcaatagatag
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