Leopardus geoffroyi (Geoffroy's cat): 123601982
Help
Entry
123601982 CDS
T10761
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123601982 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123601982 (KDM2A)
04121 Ubiquitin system [BR:
lgf04121
]
123601982 (KDM2A)
03036 Chromosome and associated proteins [BR:
lgf03036
]
123601982 (KDM2A)
Enzymes [BR:
lgf01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
123601982 (KDM2A)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
123601982 (KDM2A)
Ubiquitin system [BR:
lgf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123601982 (KDM2A)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
123601982 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
123601982 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
DUF7885
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
123601982
NCBI-ProteinID:
XP_045341964
LinkDB
All DBs
Position
D1:110163925..110280558
Genome browser
AA seq
1209 aa
AA seq
DB search
MFLLLPLLRQTGIPILVIMVHLIPMGLIPIRRPGSYQSSYLIKPVLGRVMLFGPRKESWN
QRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGKDFNVEYIQRGGLR
DPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIEMTMAQWTRYYETP
EEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKESQTESTNAILEMQY
PKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGKQ
GDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYN
IEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLSMDLELNGLESGNG
DEEAVDREPRRLSSRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKSLSGDSSSDSSRGS
HNGQVWDSQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVK
ILLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKPHTMKPAPRLTPVR
PAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQCLAPR
LPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECP
KCYQEDNSEKAQKRKMEESDEESVQAKVLRPLRSCDEPLTPPPHSPTSMLQLIHDPVSPR
GMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAK
IRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHCPARTPQRGDEEGL
GGEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMSVFRYLSRRELCEC
MRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLSWTNISKKQLTWLV
NRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPADKPGQD
NRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQSSNLLTAVGSSTR
YSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHFISDLSINSLYCLS
DEKLIQKIS
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgttcctactgcttcctttattgaggcagacaggaattcctattctagtgatcatggtg
catcttatacccatgggccttatacccatcagaaggcccgggtcctaccagtcttcctac
ctgattaagcctgtccttggaagagtgatgcttttcggtcccagaaaagaatcctggaac
cagcgtggtaccatgcgacgacgctatgaagatgatggcatttcagatgatgaaattgaa
gggaaaagaacttttgacttggaagagaagctccacaccaacaaatataatgcaaatttt
gttacttttatggaaggaaaagattttaatgtagagtatattcagcggggtggcttaaga
gaccctctgattttcaagaattcggatggacttggaataaagatgccagatccagacttc
actgtgaatgatgtcaaaatgtgcgtggggagtcgtcgcatggtggatgtcatggacgtg
aacacacagaaaggcattgaaatgaccatggctcagtggacacgctactatgagacccca
gaggaggagcgagaaaaactctataatgtcatcagcctagagttcagccacaccaggctg
gagaatatggtgcagaggccctccacggtggatttcattgactgggtagacaacatgtgg
ccgaggcatttgaaggaaagtcagactgaatcaacaaatgccatcttggagatgcagtac
cccaaagtgcagaagtactgtctgatgagtgttcgaggctgctatactgacttccatgtg
gactttggtggtacctctgtttggtatcacatccatcaagggggaaaggtcttctggctc
atcccccctacagcccacaacctggagctgtacgagaattggctgctgtcagggaaacag
ggagacatctttctgggtgaccgggtatcagattgtcagcgcattgagctcaagcagggc
tataccttcgtcattccctcaggctggattcatgctgtgtatactcctacagacacatta
gtctttggaggcaattttttacatagtttcaatatccccatgcaattaaaaatatacaac
attgaagatcggacacgggttccaaataagttccgctatccattctactatgagatgtgt
tggtatgtgttggagcgctatgtatactgcataaccaaccgctcccacctaactaaggaa
tttcaaaaagagtccctcagtatggatttggaattaaatgggttggaatctggaaatggg
gatgaggaagcagtggatcgagaaccaaggcgcctgagcagtaggcgctctgtcctcacc
agccccgtagccaatggggtcaacctggactatgacggactgggcaaaacctgccgaagt
cttccaagtctgaagaaaagtttgtcgggggactcatcctctgactctagccggggctcc
cacaatggccaagtgtgggattcccagtgtagcccccgaaaggacaggcaggtgcatctg
acccattttgagcttgaaggccttcgctgtcttgtagataagttggagtctctgccactg
cacaagaaatgcgtccccacagggatagaagatgaagatgctcttattgccgacgtaaag
attttgctggaggagcttgccaacagcgatcccaagttagccctcactggagtccctata
gtacagtggccaaaaagggataagcttaaattccccacccggccaaaggtgcgggttcct
accatccccatcacaaagcctcacactatgaaaccagctcctcggttaacacctgtgagg
ccagctgctgcctcccccatagtgtcaggagcccggcggagacgagtgcgctgtcgaaaa
tgcaaagcctgtgtgcaaggagagtgtggtgtctgccactactgcagggacatgaagaag
ttcggggggcctggtcgcatgaagcagtcgtgtgtccttcggcagtgcttggcgcccaga
ctgcctcactcagtcacatgttccctctgtggagaggtggatcaaaatgaggagacacag
gacttcgagaagaaacttatggaatgctgtatctgcaacgagattgttcatcctggctgc
ctccagatggatggagaggggttgcttaatgaggaattgccaaattgctgggagtgtcca
aagtgctaccaggaggacaactcagagaaagcccagaagcggaaaatggaagagagtgat
gaagaatccgtgcaagccaaagtcctgcggcccctgcggagctgcgacgagcccctcacg
cccccgcctcactcacccacttctatgctacagctcatccatgacccggtttcccctcgg
ggtatggtgactcggtcatcccctggggctggccccagcgaccaccacagtgccagccgg
gatgagcgcttcaaacggcggcagttgctgcggctgcaggccacagagcgcaccatggta
cgggaaaaggagaacaatcccagcggcaaaaaggagctgtctgaagttgagaaagccaag
atccggggatcgtacctcactgtcacgctacagaggcccaccaaagagctccacgggaca
tccattgtgcccaagctgcaggccatcacggcctcctctgccaaccttcgccattccccc
cgcgtgctagtacagcactgcccagcccgaaccccccagcgtggggatgaggaggggctg
gggggagaggaggaggaagaggaggaggaggaggaggaagatgacagtgcagaggagggg
ggtgcagccaggctgaatggccggggcagttgggctcaggatggagacgaaagctggatg
cagcgggaggtctggatgtctgtcttccgctacctcagccgcagagaactttgtgaatgt
atgcgagtgtgcaagacgtggtataaatggtgctgcgacaagagactttggacaaaaatt
gacttgagtaggtgtaaggctattgtaccccaggccctcagtggcatcatcaagaggcaa
ccagttagcctggacctcagttggaccaacatctccaaaaaacaactgacgtggctcgtc
aatagactgccaggactgaaagacctcctcctagcaggctgttcctggtctgcagtctct
gccctcagcacctccagctgcccccttctcaggacccttgatcttcggtgggcagtggga
atcaaggaccctcaaattcgggacttgctgactccaccggctgataaaccaggtcaggac
aatcgcagcaagctccggaacatgactgacttccggctggcaggccttgacatcacagac
gccacacttcgcctcatcattcgccacatgcccctcctttctcgactcgacctcagtcac
tgcagccacctgacagatcagtcctccaatctgctcaccgctgtcgggtcttccactcgc
tactccctcacagagctcaacatggcaggttgcaataaattgacagaccagaccctgatc
tacctacggcgcatcgccaatgtcaccttgattgaccttcgaggatgtaagcagatcact
cgaaaagcctgcgagcacttcatctcagacttgtccatcaacagtctctactgcctgtct
gacgagaagctgatacagaagatcagctaa
DBGET
integrated database retrieval system
