Leopardus geoffroyi (Geoffroy's cat): 123603932
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Entry
123603932 CDS
T10761
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgf04040
]
123603932 (SCN4A)
Ion channels [BR:
lgf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123603932 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
123603932
NCBI-ProteinID:
XP_045345404
LinkDB
All DBs
Position
E1:complement(46384683..46429249)
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AA seq
1828 aa
AA seq
DB search
MASSSLPTLVPLGPESLRPFTRESLAAIERRAVEEEARQQRNKQMEIEEPERKPRSDLEA
GKSLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSII
RRGAIKVLIHSLFSMFIMITILTNCVFMTMSNPPSWSKHVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTIFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYGNDTW
YGNETWYGNETWTGHESWASNYTFDWDAYINDEGNFYFLEGANDALLCGNSSDAGHCPEG
YECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIF
LGSFYLINLILAVVAMAYAEQNETTLAEDQEKEEEFQQMLEKFKKQQEELEKAKAAQALE
GGEADGDPAHGKDCNGSLDTSLGEKGPPRQSCSADSGISDAMEELEEAHQKCPPWWYKCA
HKVLIWNCCTPWVKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFDNMLTV
GNLVFTGIFTAEMVLKLIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKEYVCK
IAADCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLV
VLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLLRGKILSPK
EIMLSLGGPEEAGAAEEAGESASEDEKKEPPPEEDDKDLKKDNHILSHVGLVDGSPPSIE
LDHLNFINNPYLTIHVPIASEESDLEMPTEEDTDTFSEPEDGKQPPQPLDGNSSVCSTAD
YKPPEEDPEEQAEENPEGEQPEECFTEACVQRCPFLYVDISQGRGKMWWTLRRACFKIVE
HNWFETFIVFMILLSSGALAFEDIYIEQRRTIRTILEYADKVFTYIFILEMLLKWVAYGF
KVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVV
VNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDISEVNNKSEC
ESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPQYEVNI
YMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSK
KPQKPIPRPQNKIQGMVYDCVTKQVFDITIMILICLNMVTMMVETDDQSQLKVDILYNIN
MVFIIIFTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRV
IRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKK
ESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTSVRGDCG
NPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDP
DATQFIAYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLG
DSGEMDALKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHLLQRTVKQ
ASYMYRHSQDGSGDGGPEKEGLIANTMSKMYGHENGNSSVQSTGEEKGSTGDSGPSIGLT
PISPSDAALPPSPSPGQTVRPGVKESLV
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcatctctgcccactctggtgcctctgggccctgagagcctgcgccccttc
acccgggagtccctggcagccatagaacgccgggcagtggaggaggaggcccggcagcag
cggaacaagcagatggagattgaggagcctgaaaggaagccacgcagcgacctggaggct
ggcaagagcctgccccttatttatggggaccccccaccagaggtcatcggcatccccctg
gaggacctggacccctactacagcgacaagaagaccttcatcgtgcttaacaagggcaag
gccatctttcgcttctccgctacaccagctctctacatgctgagccctttcagcatcatc
agacgtggtgccatcaaggtgctcattcactcgctgttcagcatgttcatcatgatcacc
atcctgaccaactgtgtattcatgaccatgagcaacccgccttcctggtccaagcatgtg
gagtacacattcacagggatctatacctttgagtccctcatcaagatgctggcccgaggc
ttctgcattgatgacttcacattcctccgggacccctggaactggctggacttcagtgtc
atcatgatggcgtacctgacagagtttgtggacttgggcaatatctcagccctgagaacc
ttccgggtgctgcgggccctgaaaaccatcacagtcatcccagggctgaagacgatcgtg
ggggccctgatccagtcggtgaaaaagctgtcggatgtgatgatcctcaccatcttctgc
ctgagtgtctttgccctggtcgggctgcagctcttcatgggaaacctgcggcagaagtgc
gtgcgctggcccccacccttcaacgacaccaacaccacgtggtacggcaacgatacgtgg
tatggtaatgagacgtggtatggtaatgagacgtggaccggccacgagagctgggccagc
aactatacctttgactgggacgcctacatcaatgatgaagggaacttctatttcctggag
ggtgccaatgacgccctgctttgtgggaacagcagcgatgctgggcactgccccgagggt
tacgagtgtatcaaggctgggcggaaccccaactatggctacaccagctatgacaccttc
agctgggccttcctggctctcttccgcctcatgacacaggattattgggagaacctcttc
cagctgaccctccgagcagctgggaagacctacatgatcttcttcgtggtcatcattttc
ctgggctccttctacctcatcaatctgatcctggcagtggtggccatggcatacgcagag
cagaacgagaccaccctggctgaggatcaggagaaagaagaagagtttcagcagatgctg
gagaaattcaaaaagcagcaggaggagctggagaaggccaaggccgcccaggctctggaa
ggcggggaggcagatggggacccagcccacggtaaagactgcaatggcagcctagacaca
tcactgggggagaaggggcctccaaggcagagctgcagcgcagacagcggtatctctgat
gctatggaagagctggaagaggcccaccagaagtgcccaccgtggtggtacaagtgtgcc
cacaaagtgctcatatggaactgctgcaccccatgggtgaagttcaagaacatcatccac
ctgattgtcatggacccctttgtggacctgggcatcaccatctgcatcgtgctcaacacc
ctcttcatggccatggagcattaccccatgacagaggagtttgacaacatgctcaccgtg
ggcaacctggttttcacaggcatcttcacagcagagatggtactgaagctcatcgccctg
gacccctacgagtacttccagcagggctggaacatcttcgacagtatcatcgtcaccctc
agcctggtggagctgggcctggccaacgtgcagggactgtccgtgctccgctcctttcgg
ctgctgcgtgtctttaagctggccaagtcgtggccaacgctgaacatgctcatcaagatc
atcggcaactcagtgggcgcgctgggcaacctgacgctggtgctggccatcatcgtgttc
atctttgccgtcgtgggcatgcagctgttcggcaagagctacaaggagtatgtgtgcaag
atcgccgcggactgtagcctgccccgctggcacatgcacgacttcttccactccttcctc
atcgtcttccgcatcctgtgcggggagtggatcgagaccatgtgggactgcatggaggtg
gccggccaggccatgtgcctcaccgtcttcctcatggtcatggtcatcggcaacctagtg
gtcctgaacctcttcttggcgctgctgctgagctccttcagtgccgacagcctggcagcc
tcagatgaggacggcgagatgaacaacctgcagatcgccattgggcgcatcaagtggggc
atcggctttgccaaagcctttctcctggggctgctgcgcggcaagatcctgagccccaag
gaaatcatgctcagcctcggggggcccgaggaggccggggcggcagaggaggctggggag
agtgcctcagaggatgagaagaaggagccgccgcccgaggaggatgacaaggacctgaag
aaggacaatcacatcctgagccacgtgggcctggtggacggctctccccccagcattgag
ctggatcacctcaacttcatcaacaacccctacctgaccattcacgtgcccattgcctcc
gaggagtccgacctggagatgcccacggaggaggacactgacactttctcagagcctgag
gatggcaagcagccaccgcagcccctcgatgggaactcctccgtctgcagcaccgccgac
tataagccccccgaggaagaccccgaggagcaggctgaagagaaccccgaaggggagcag
cctgaggagtgcttcacagaggcctgtgtgcaacgctgccctttcctctacgtggacatc
tcccagggccgtgggaagatgtggtggaccctccgcagggcctgcttcaagatcgtcgag
cataactggttcgagaccttcattgtcttcatgatcctgctcagcagcggggccttggcc
ttcgaggacatttacatcgagcagcggcggaccatccgcactatcttggagtatgccgac
aaggttttcacctacatcttcatcctggaaatgctgctcaagtgggtggcctatggcttc
aaggtgtacttcaccaatgcctggtgctggcttgacttcctcattgtggatgtctccatc
atcagcctggtggccaactggctgggctactcggagctgggacccatcaaatccctgagg
acgctgcgagccctgcgtcccctgagggcgctgtcccgatttgagggcatgagggtggtg
gtgaatgccctcttgggagccatcccctccatcatgaacgtgctgcttgtctgcctcatc
ttctggctcatcttcagcatcatgggcgtcaacctgtttgccggcaagttctactactgc
atcaacaccaccacctctgagaggtttgacatctctgaggtcaacaacaagtctgagtgt
gaaagcctgatgcacacgggccaggtccgctggctcaacgtcaaggtcaactatgacaat
gtgggtctaggctacctctccctcctgcaggtggccaccttcaagggctggatggacatc
atgtatgcagctgtggactcccgggagaaggaggaacagccacagtatgaggtgaacatc
tacatgtacctctattttgtcatcttcatcatcttcgggtccttcttcaccctcaacctc
tttattggcgtcatcatcgacaacttcaaccagcagaagaagaagtttggagggaaagac
atcttcatgacggaggaacagaagaaatactataatgccatgaagaagcttggctccaag
aagcctcagaagccaattccccggccccagaacaagatccagggcatggtgtatgactgc
gtgactaagcaggtgttcgacatcacgatcatgatcctcatctgcctcaacatggtcacc
atgatggtggagacagacgaccagagccagctcaaagtggacatcctgtacaacatcaac
atggtcttcatcatcatcttcaccggggagtgtgtgctcaagatgctcgccctgcgccag
tactatttcaccgtcggctggaacatcttcgactttgtggttgtcatcctatccattgtg
ggactcgcgctctccgatctgatccagaaatacttcgtgtcacccacactgttccgagtg
atccgcctggcgcggatcggacgtgtcctgcggctgatccgcggggccaagggcatccgg
actctgctctttgccctcatgatgtccctgcctgccctcttcaacatcggcctcctcctc
ttcctggtcatgtttatctactccatcttcggcatgtccaactttgcctatgtcaagaag
gagtcgggcatcgatgacatgttcaactttgagacctttggcaacagcatcatctgcctc
ttcgagatcaccacgtcggctggctgggatgggctcctcaaccccatcctcaacagcggg
ccccctgactgtgaccctacactcgaaaacccaggcaccagtgtcaggggcgactgtggc
aacccctccatcggcatctgcttcttctgcagctacatcatcatctccttcctcatcgtg
gtcaacatgtacattgccatcatcctggagaacttcaatgtggccactgaggagagcagc
gagccccttggcgaggacgactttgagatgttctacgaaacgtgggagaagtttgaccct
gacgccacacagttcattgcctacagccgcctctctgactttgtggacaccctgcaggag
ccactgagaatcgccaagcccaacaagatcaagctcatcacgctggacctgcccatggtg
ccaggggacaagatccactgcctggacatcctctttgccctcactaaggaagtcctaggt
gactctggggaaatggacgccctcaaggagacgatggaggagaaattcatggcagccaac
ccctccaaagtctcctacgagcccatcaccaccaccctcaagaggaagcatgaggaggtg
tgtgccatcaagatccagagggcctaccgccggcacctgctccagcgcactgtgaagcag
gcatcctacatgtaccgccacagccaggatggcagtggggatgggggtcctgagaaggag
ggtctgatcgccaacaccatgagcaagatgtatggccacgagaatgggaacagcagtgtg
cagagcacaggtgaggaaaagggctcaacaggggactctggaccttccataggactcaca
cccatcagcccctcagacgctgccctccctccttccccatccccagggcagacagtgcgc
ccgggggtcaaggaatctctcgtctag
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