Leopardus geoffroyi (Geoffroy's cat): 123604166
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Entry
123604166 CDS
T10761
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf00514
Other types of O-glycan biosynthesis
lgf04330
Notch signaling pathway
lgf05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
123604166 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
123604166 (RFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
123604166 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lgf01003
]
123604166 (RFNG)
Enzymes [BR:
lgf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
123604166 (RFNG)
Glycosyltransferases [BR:
lgf01003
]
Glycan extension
O-Glycan
123604166 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
123604166
NCBI-ProteinID:
XP_045345896
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All DBs
Position
E1:complement(60558619..60562523)
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AA seq
379 aa
AA seq
DB search
MSRARGALCRACLALAAALAALLLLPLPLPLPLPRAPAPTPGPGPRAPPARLATAPRLRP
DDVFIAVKTTQKNHGPRLGLLLRTWISRARQQTFIFTDGDDPELQLQGGSHVINTNCSAV
HTRQALCCKMAVEYDKFIESGRKYVVAVPLCPLGEPRAEAGPTHPGQGGGGPQLCQPLTR
ESSPTAPRWFCHVDDDNYVNPEGLLQLLSTFSPSQDVYLGRPSLDHPIEAAERVQGGGTV
TTVKFWFATGGAGFCLSRGLALKMSPWAGLGSFMSTAERVRLPDDCTVGYIVEGLLGARL
LPSSLFHSHLENLQRLPPDAVLQQVTLSYGGPENPRNVVNVAGGFSLQQDPTRFKSVHCL
LYPDTDWCPMHKQSDLVSR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgcgcggggggcgctgtgccgggcctgcctcgcgctggccgcggccctggcc
gcgctgctgctgctgccgctgccgctgccgctgccgctgccccgcgcgccggccccgacc
ccgggccccggcccgcgcgcgccccccgcccgactcgccaccgccccccgcttgcggccg
gacgatgtcttcatcgcggtcaagaccacccagaagaaccacgggccacgcctcgggctg
ctgctgcgcacctggatctcccgggcccgccagcagacattcatcttcaccgatggggat
gaccctgagctacagctccagggaggcagccacgtaatcaacactaactgctcagccgtg
catacccgtcaggcgctatgctgtaagatggcagtggagtacgacaagttcatcgagtcc
ggacgcaagtatgtggtggccgtgcccctgtgtccccttggagagcccagggctgaggct
gggcccacacacccgggccaggggggtggaggcccccaactgtgccagcccctcactcgt
gagagttcccccacggcccccaggtggttctgccatgtggatgacgacaactacgtgaac
cccgaaggcctgctccagctgctgtccactttctcgcccagccaggatgtctacctgggg
cggcccagcctcgaccaccccattgaggccgccgagagagtccaggggggcggaactgtg
accactgtcaagttctggttcgctaccggtggggccgggttctgcctgagcagagggctc
gctctgaagatgagcccctgggccggcctgggcagcttcatgagcactgctgagcgggtg
cggctgccggacgactgcacggtgggctacatcgtggaggggctgctgggtgctcggctg
ctgcctagctcactcttccactcccacctggagaacctgcagaggctgccgcctgacgcc
gtgctacagcaggtcaccctgagctacgggggtcctgagaacccacgtaacgtggtgaat
gtggcaggaggcttcagcctgcagcaggatcccactcggtttaagtctgtccactgcctt
ctctacccggacacagactggtgtcccatgcacaagcagagtgacctcgtctctcggtga
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