KEGG   Leopardus geoffroyi (Geoffroy's cat): 123609888
Entry
123609888         CDS       T10761                                 
Name
(RefSeq) LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DP alpha 1 chain
  KO
K06752  MHC class II antigen
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04145  Phagosome
lgf04514  Cell adhesion molecule (CAM) interaction
lgf04612  Antigen processing and presentation
lgf04640  Hematopoietic cell lineage
lgf04658  Th1 and Th2 cell differentiation
lgf04659  Th17 cell differentiation
lgf04672  Intestinal immune network for IgA production
lgf04940  Type I diabetes mellitus
lgf05140  Leishmaniasis
lgf05145  Toxoplasmosis
lgf05150  Staphylococcus aureus infection
lgf05152  Tuberculosis
lgf05164  Influenza A
lgf05166  Human T-cell leukemia virus 1 infection
lgf05168  Herpes simplex virus 1 infection
lgf05169  Epstein-Barr virus infection
lgf05310  Asthma
lgf05320  Autoimmune thyroid disease
lgf05321  Inflammatory bowel disease
lgf05322  Systemic lupus erythematosus
lgf05323  Rheumatoid arthritis
lgf05330  Allograft rejection
lgf05332  Graft-versus-host disease
lgf05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    123609888
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    123609888
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    123609888
   04612 Antigen processing and presentation
    123609888
   04658 Th1 and Th2 cell differentiation
    123609888
   04659 Th17 cell differentiation
    123609888
   04672 Intestinal immune network for IgA production
    123609888
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    123609888
   05164 Influenza A
    123609888
   05168 Herpes simplex virus 1 infection
    123609888
   05169 Epstein-Barr virus infection
    123609888
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    123609888
   05152 Tuberculosis
    123609888
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    123609888
   05140 Leishmaniasis
    123609888
  09163 Immune disease
   05310 Asthma
    123609888
   05322 Systemic lupus erythematosus
    123609888
   05323 Rheumatoid arthritis
    123609888
   05320 Autoimmune thyroid disease
    123609888
   05321 Inflammatory bowel disease
    123609888
   05330 Allograft rejection
    123609888
   05332 Graft-versus-host disease
    123609888
  09166 Cardiovascular disease
   05416 Viral myocarditis
    123609888
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    123609888
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lgf04147]
    123609888
Exosome [BR:lgf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123609888
  Exosomal proteins of epithelial cells
   123609888
  Exosomal proteins of breast milk
   123609888
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3
Other DBs
NCBI-GeneID: 123609888
NCBI-ProteinID: XP_045356863
LinkDB
Position
B2:complement(32166566..32171198)
AA seq 281 aa
MHLEDIRCQTQVMILRVISLAALLSPHGTGAIRVGHVSTYVQFVQTHRPSGEYMFXFGED
EQFYVDLDKKETIWHLPEFIRAFNFDAWRGTADIVTAKKNLNTLIQRSNHTRATNEPPEV
AVFPKEPVELGQPNTLICHVYKFFPPVLNVTWLCNGQTVTKGVAESIFLPSTEFRFHKFH
YLTFIPTAEDVYDCKVEHWGLDQPLLQHWEAQEPIEVPETMETVVCALGLVVGVAGIITG
TIILKTRRPDNIPGCRGPCELSQSWDHYFRIIQSGKQTRGG
NT seq 846 nt   +upstreamnt  +downstreamnt
atgcaccttgaagacataaggtgccagacccaagtcatgatcctgcgagtcatctccctg
gctgcccttctgagtccccatggaactggggccatcagggtgggccacgtgtcaacgtat
gtccagtttgtccagacacacagaccctctggagagtacatgttttagtttggtgaggat
gagcagttctatgtggatctggataagaaggagaccatctggcatctgccagagtttatt
cgtgccttcaactttgatgcttggaggggtactgctgacattgtcacggcaaagaagaac
ctgaacactctgatccaacggtccaaccacaccagggccacaaatgagccacctgaggtg
gccgtgtttcccaaggagcctgtggagcttggacagcccaacaccctcatctgccatgtg
tacaagttcttcccacctgtgctcaatgtcacatggctgtgcaatgggcagacggtcacc
aaaggtgtggctgagagcatcttcctgcctagcacagaattcaggttccacaagttccac
tacctgaccttcattcccacggctgaagatgtctatgactgcaaggtggagcactggggc
ttggaccagccactccttcagcactgggaggcccaggagcctatcgaggtgcctgagaca
atggagactgtggtctgtgccctgggcctggtggtgggcgtggcaggcatcatcactggc
accatcatcctgaagaccaggaggcccgacaacatccctgggtgcaggggcccctgtgag
ttatcccagagctgggatcattatttccgcatcatacagagcgggaagcagacacgagga
gggtga

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