KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_181463
Entry
LOTGIDRAFT_181463 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    LOTGIDRAFT_181463
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lgi03400]
    LOTGIDRAFT_181463
Enzymes [BR:lgi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LOTGIDRAFT_181463
DNA repair and recombination proteins [BR:lgi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     LOTGIDRAFT_181463
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT BRCT_2 DNA_ligase_IV RNA_ligase
Other DBs
NCBI-GeneID: 20244445
NCBI-ProteinID: XP_009044235
JGI: 181463
UniProt: V4CSZ7
LinkDB
Position
Unknown
AA seq 922 aa
MAASTSRDANEVTVASKVGFAELCGLLEKISKTQGNDKKKKVLKEFVDIWRNYHKELHGD
KPDLVDSFYPAMRLLLPHLDKERLAYGIKENMLAKLMIEVLCLGKDSPDATRLLNFKAPK
TARGDAGDFANVAYYVLKNRCPDKGTLAIQDVNDCLDAIANNNAAKKKEPVRKNILHLLK
NLSAIEQKWLIRMIVKELKVGLSQASMLSVYHTDAEELYNVNNNLEKVCRLLRDPAVRAH
EIGITIFSPFTPMLGERGSPEKVENLMDGKMYFIETKFDGERMLLHKNEEEYKYFSRSGK
EYTHVFGSNAFDGSLTPYIANSFKPGIKKCILDGEMLGYHAQTQTYGTKAEKFDIKSSDL
AETKGYQACLQVFDILLYNDKVLTNLPLKERLKYIDKVFNTIEGRILISQVKEGHNNQDC
ADALNEAIDGREEGIMVKNPESVYRPNTRKGGWFKIKPEYIGGLMDELDIVIVGGYFGVG
SRAGMMSHFMCAVAVPSDDGEHPQVFHSFCKVGSGYSKKELSDFNKKLADHWQVFDKRNP
PDCLILAAGFKEKPDAWIHPSKSCIVQVKAAEITESDKYKTGCTLRFPRVECFRDDKPWF
ECLSTVELEELRQKSGGKLAGTRYDLDDSAPVKKKRKVISRVVRPTLGSRFKAIDTSNIT
QISKMLENKEICVINGSEDWPKPELEKKIVEYGGTIVQNPGGETYCILADKIAVRVNNLI
KRNIYDIVKGTWFVRCIENETYIPWTPGDMIHISPKTQRKFDEDYDVYGDSYYTDTQEDQ
LKHVFDKMEKFEDEDMLDNEDIAKIEENYFPDESPYGLFRTCRIYVDNNLVISDASTKIP
NSSLDLIGLELRFFGATVSERLDEKVSHVLIDSKDTSRVGQLREVRRRRSKKFNIINEDW
IKTCIEEGELCNERKYEPTVTT
NT seq 2769 nt   +upstreamnt  +downstreamnt
atggcagcttctacatctagggatgctaatgaagtgacagttgcttccaaagttggtttt
gctgaattatgtggacttttagaaaagattagcaaaactcaaggcaatgacaagaaaaag
aaagttttgaaagagtttgttgatatctggagaaattatcataaggaattgcatggagac
aaacctgacttggtggattcattttacccagccatgagattattgttacctcatctagat
aaagaaagactggcttatggcattaaagagaatatgctggctaaattgatgattgaagtt
ttatgtttgggtaaagatagtccagatgcaacaagattgttgaatttcaaagcacctaaa
acagctagaggggatgctggtgattttgctaatgtagcctactatgtattaaaaaacagg
tgccctgacaaaggtacattagctatacaagatgttaatgattgtttagatgctatagct
aataataatgcagctaagaagaaagaaccagttcgaaaaaatatcctccatttattaaag
aatctatcagctatagaacagaaatggttaataagaatgattgtgaaagagctaaaagtt
ggtttgagtcaggcctccatgctgtctgtgtatcatacagatgctgaagagctatataat
gttaacaataaccttgagaaggtgtgtagattattgagagatccagctgttagagcacat
gagataggaataactatcttctcgccttttactccaatgttaggagaaagaggctcacca
gaaaaggtggagaatttaatggatggtaaaatgtattttattgaaactaagtttgatgga
gagagaatgttattacataaaaatgaagaagaatataaatatttttctagaagtggtaaa
gaatatacacacgtgtttggtagtaatgcatttgatggttctctaactccctatatagct
aatagttttaaaccaggtataaagaaatgtatattagatggagaaatgttgggctatcat
gctcaaactcaaacttatggtacgaaagctgaaaagtttgatattaaatcatcagattta
gctgaaactaaaggatatcaagcttgtctacaagtatttgatattttactctataatgat
aaagttctgactaatctaccattaaaagaaagattaaagtatatagataaagtatttaat
actatagaaggtagaatactgatcagtcaggttaaagagggacataacaatcaagattgt
gcggatgctctgaatgaggctatagatggtagagaggaaggtattatggtgaagaaccca
gaatcagtgtacagacctaacacaagaaaaggaggatggtttaaaattaaacctgagtat
atcggtggtttaatggatgagttagatatagttatagttggaggatattttggtgtagga
agtagagctggtatgatgtcacattttatgtgtgctgtggctgtaccttctgatgatggg
gaacatcctcaagtttttcattcattttgtaaggttggttcaggttattctaagaaagaa
ttaagtgacttcaataagaaactagctgatcattggcaagtatttgacaagaggaaccct
ccagactgcctgattttagcagcaggatttaaagagaaaccagatgcctggatccatcct
tctaaatcatgtattgttcaggtgaaagctgctgaaataaccgagagtgataaatataaa
actggttgtacattaaggtttcctagagtggaatgttttcgagatgataaaccctggttt
gaatgtttatctactgtagaacttgaagaattaagacagaagtctggaggtaaattagct
ggaacaagatatgatttagatgacagtgctccagtgaagaagaagcgtaaagtgatatca
agagttgtccgccctacattaggttcacgatttaaagccatagatacctctaatattacg
cagatatccaagatgttagaaaataaagaaatatgtgtaataaatggatctgaagattgg
ccgaaaccagaattagagaagaaaatagtagaatatggtggaacaattgtacaaaatcca
ggtggagaaacatactgtatattagctgataagatagctgtaagagttaataaccttatc
aaacgtaatatttatgatattgttaaaggtacttggtttgttagatgtattgaaaatgaa
acatatattccatggactccaggagatatgatacacatctcacctaaaactcaacgtaag
tttgatgaagattatgatgtatatggtgatagttattatacagatacacaagaagatcag
ttaaaacatgtttttgataaaatggaaaagtttgaagatgaagatatgttagacaatgaa
gatatagctaagatagaagagaattattttcctgatgaatcaccttatggtttatttaga
acgtgcaggatctatgtggataacaatttagttatcagtgatgcctcaacaaaaattcct
aatagtagtcttgatcttattggcctggagttgagattctttggtgcaacagtgtcagaa
agactggatgaaaaggtctcacatgtattgatagattcaaaagatacaagtcgtgttggt
cagctacgtgaagttagaagaagaagaagtaaaaagttcaatattatcaatgaagattgg
attaaaacttgtattgaagaaggagagctatgtaatgaaaggaaatatgagccaactgtt
actacctga

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