Lottia gigantea (owl limpet): LOTGIDRAFT_208208
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Entry
LOTGIDRAFT_208208 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K05692
actin beta/gamma 1
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03082
ATP-dependent chromatin remodeling
lgi04145
Phagosome
lgi04814
Motor proteins
lgi04820
Cytoskeleton in muscle cells
lgi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LOTGIDRAFT_208208
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
LOTGIDRAFT_208208
09142 Cell motility
04814 Motor proteins
LOTGIDRAFT_208208
04820 Cytoskeleton in muscle cells
LOTGIDRAFT_208208
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
LOTGIDRAFT_208208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgi03021
]
LOTGIDRAFT_208208
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_208208
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_208208
03029 Mitochondrial biogenesis [BR:
lgi03029
]
LOTGIDRAFT_208208
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lgi04812
]
LOTGIDRAFT_208208
04147 Exosome [BR:
lgi04147
]
LOTGIDRAFT_208208
Transcription machinery [BR:
lgi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
LOTGIDRAFT_208208
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
LOTGIDRAFT_208208
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
LOTGIDRAFT_208208
NuA4 complex
LOTGIDRAFT_208208
Chromatin remodeling factors
BAF complex
LOTGIDRAFT_208208
PBAF complex
LOTGIDRAFT_208208
GBAF(ncBAF) complex
LOTGIDRAFT_208208
SWR1 complex
LOTGIDRAFT_208208
Mitochondrial biogenesis [BR:
lgi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
LOTGIDRAFT_208208
Cytoskeleton proteins [BR:
lgi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
LOTGIDRAFT_208208
Exosome [BR:
lgi04147
]
Exosomal proteins
Proteins found in most exosomes
LOTGIDRAFT_208208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
20246049
NCBI-ProteinID:
XP_009043796
JGI:
208208
UniProt:
V4BC69
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSY
ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPAIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgacgtagccgcactcgtagttgacaatgggtctggtatgtgtaaagcaggt
tttgccggagacgatgctccacgagctgttttcccctccattgtcggaagacctagacat
cagggtgttatggttggtatgggacagaaagacagctatgtaggagatgaagctcaatct
aagagaggtatcctcaccttaaaatacccaattgaacatggtattgttaccaactgggat
gatatggagaaaatctggcatcacactttctacaatgaacttcgagttgccccagaagaa
catcccgtcctcctcacggaggctccactcaatcctaaagccaacagagaaaagatgacc
caaattatgtttgaaaccttcaattcaccagctatgtatgtagctattcaagctgtattg
tccctatatgcctctggtcgtaccactggtatcgtacttgattctggagatggtgtgagt
cacacagtaccaatctacgaaggttatgctcttccccatgccatcatccgtttggatttg
gctggtcgagatttgaccgactacttgatgaaaattttgacagaaagaggttactccttc
accacaacagctgaaagagaaatcgtcagagacatcaaagaaaaattatgttatgttgct
ttggatttcgaacaggaaatgcaaactgctgcatcttcatcatccttagagaaatcttac
gaattacctgatggtcaagtcatcactattggtaacgaacgattccgatgtcccgaaact
ttatttcaaccatcattcattggtatggaatctgctggtatccatgaaaccacctacaac
tccatcatgaaatgtgatgttgatatcagaaaagacttgtacgccaacactgtattatct
ggaggaacgacaatgtttccaggtattgctgacagaatgcagaaagaaatcacagcctta
gccccaccaaccatgaaaattaaaatcatcgctccacctgagagaaaatactctgtatgg
attggtggttctatcttggcttctctctcaaccttccaacagatgtggatctccaaacag
gaatatgatgaatctggcccagcaatcgtacacagaaaatgcttctaa
DBGET
integrated database retrieval system