Lottia gigantea (owl limpet): LOTGIDRAFT_208992
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Entry
LOTGIDRAFT_208992 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04120
Ubiquitin mediated proteolysis
lgi04140
Autophagy - animal
lgi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
LOTGIDRAFT_208992
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
LOTGIDRAFT_208992
04140 Autophagy - animal
LOTGIDRAFT_208992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_208992
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_208992
Enzymes [BR:
lgi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
LOTGIDRAFT_208992
Membrane trafficking [BR:
lgi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
LOTGIDRAFT_208992
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
LOTGIDRAFT_208992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
TRAF3_RING
zf-TRAF_2
zf-C3HC4_3
zf-rbx1
zf-C3HC4_4
zf-RING_UBOX
U-box
zf-RING_5
zf-Nse
Sina_ZnF
TBK1_CCD1
Striatin
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
20246109
NCBI-ProteinID:
XP_009051677
JGI:
208992
UniProt:
V4ASM7
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MAERLDGRSTLGNTSFPSSVGSSSGSEGYDHLQRVEGYDYEFVPPPDSKYECVICLLVLR
EPQQTKCGHRFCKVCIIKWLRESNKTCPVDNAKIVESDLFADNFAKREIQNFNVRCPNKS
QGCEKIVMLNLIQKHIEDCPFGLIPCSNNCSDILLRRDLNHHLSSVCCYRQITCHSCSRR
LTYNDLQKHEFDCPEIIVVCEKCDKQLLRKWKQHHENTECLKTVVNCMFQPLGCPQQMER
QTMEEHMEKGLSDHMKMLCSEVVQISRCLGLPTGQNYNPTDNGSISDFQSLKKENNLRDS
SLAEHGQEISQLNDKFREYERINRDLKQRVKYLESCIDERDGRSCNGIYYWKIKDYSKLR
REAQLGNMPAIHSPPFYSSFYGYKLCVRVNLNGVDSAKGSFLSIFIHFLQGDFDDLLDWP
FAGRIILSVIDQNSTADYRSHIVETLIAKPTLAAFQKPTTTRNHKGFGYMEFVPLHVLDK
GQFLKNDTLIIKAHVIPNS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagattagatggtagaagcacactgggaaacacgtcatttcctagcagtgtt
ggaagttcgagcggtagtgaaggctatgaccatctacaaagagttgaaggctatgattat
gaatttgtaccacctcctgattccaaatatgaatgtgttatttgtttattggtgttacgg
gaaccacaacaaactaaatgtggacatagattctgtaaagtctgcattattaaatggcta
agagagtccaataagacttgtccagttgacaatgccaagatagtagagagtgacttattt
gcagataattttgctaaaagagaaatccagaattttaatgttcgttgtccaaataaaagt
caaggatgtgagaagattgtcatgttgaatttaatacaaaaacatatagaagattgtccg
tttggtttgataccatgttctaacaattgttctgatatcttactacgcagggatctgaat
catcatctatcatcagtatgttgttaccgacagatcacttgtcattcctgttcccgtcga
cttacttataatgatctacagaaacatgaatttgattgtccagaaataattgtggtctgt
gaaaagtgtgataaacaacttttgagaaaatggaaacaacatcatgaaaacacagaatgt
ttaaaaactgtggtaaattgtatgtttcaacctttaggatgtccacagcagatggaaaga
cagacaatggaagaacatatggagaaaggtttatcagatcatatgaaaatgttatgcagt
gaagttgttcagattagtcgttgtttgggactacctacaggacaaaattacaatcccacg
gataatggatcaatatctgattttcagtctttgaaaaaggaaaacaatttacgtgatagt
agtttagcagagcatggacaggaaatttctcaattgaatgacaagtttcgagagtatgaa
cggattaatcgtgatttgaaacaaagagtgaaatatttagaaagttgtattgatgaacgc
gatggacgttcttgtaacggaatttattactggaaaataaaagactacagtaaattacgg
cgtgaagctcagcttggcaatatgccagccattcatagtccaccattttattctagtttc
tatggttacaaactatgtgtacgtgttaatttaaatggagtggatagtgcaaaaggatca
tttttatcaatatttatccattttttacagggtgattttgatgatctattagactggcca
ttcgctggtcgaataattctatcagtaattgaccaaaacagtactgctgattatcgcagt
catattgtggaaacattaatcgccaaacctacattggctgcatttcaaaaaccaaccacc
acacgtaaccataaaggatttgggtatatggaatttgtgcctttacatgtgttagacaaa
ggacaatttttgaaaaatgacacattgataataaaagcacatgttattcctaacagttag
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integrated database retrieval system
