Lottia gigantea (owl limpet): LOTGIDRAFT_225561
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Entry
LOTGIDRAFT_225561 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOTGIDRAFT_225561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_225561
03032 DNA replication proteins [BR:
lgi03032
]
LOTGIDRAFT_225561
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
LOTGIDRAFT_225561
mRNA cycle factors
Common to processing body (P body) and stress granule
LOTGIDRAFT_225561
DNA replication proteins [BR:
lgi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
LOTGIDRAFT_225561
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Tmemb_18A
PIN_12
Motif
Other DBs
NCBI-GeneID:
20247292
NCBI-ProteinID:
XP_009048355
JGI:
225561
UniProt:
V4AAJ5
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MSKHRCQVVAQQLLHEALQIDNQLSHIVACRINGEEGWRNLHRMRHELKGRLQQVLLLDP
SLANKHNIEQLLWKSAYYQVIEVFRKNLTEEHDENMKTQLLQILQEGTDFFEGLVKRMQS
VYSFDLETFLDSNQLPPENLNRTVKLCLMISQKLLICLGDISRYREQANETTNYGRARSW
YMKAQQLAPKNGRPYNQLAILALYTRRKLDAVYYYMRSLAASNPFITARESLMSLFDEAR
KKSETVERKKTEEKELKKKKMEQNEKTNKHRIEIWISSDGSSTENQADVDSQEEDLSQLS
GIELNKRFVLSFLIVHGKLFTKIGMELFAESCSQMLQEFDVLLHHSPCVISSHRLIQLMA
INMFAIENTALKDESLEDSCRSLLQDYAVQMGLDMFGLLATRCSQLMATHLQSSEYPASL
MNEDLHQLTPGLKVWTDWMMCHSGLWNPAPTPRPPDVGPLIDPWKCTADLCNILKDVDTS
HIKLYRHKKENCDAIILNEDNLMAGFVPMLGAPVESCFVHSTVDKEIARDALRLEKFGLF
SDYLCGIEPPMLSYNVETKQYYSIAPVTEGENESVDEQNDYSESEDVIVESEEEIEVISG
DEDHVRHLKVKREHLKKKVKEQTKHKENVEALLEKDRHKKIELEIHPRFLVPDTNCFIDQ
FNNLASILESKKYTIVIPLVVINELDGLSKGSKEAKYDSKEHASMVQQHATTALQYLEAQ
FQRKHSHLRAQTSKGSILETIAFRSEEIDATVGFGTNDDLILSCCLHYCKDKARDFMPKG
KDAPVHLYRDVVLLTDDRNLRLKAHTCNVPVKEVGAFKKWSRIS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacatagatgtcaggtggtagctcaacaacttttacacgaggcattacagatt
gataatcaactatcacatatagtagcttgtagaatcaatggtgaagaaggatggagaaat
ctacatagaatgagacatgagttaaaaggtcgtcttcaacaggttttgttattagatcca
tcattagccaataaacataatatagaacagttgctatggaaatcagcctattatcaagtt
attgaagtattcagaaaaaatttaacagaagaacatgatgaaaatatgaaaactcaattg
ttacagattttacaagaaggcacagatttttttgaaggtttagtaaagagaatgcagtct
gtgtatagttttgatttagagacatttttagattcaaatcaactgcctccagagaattta
aacagaacagttaaactatgtttaatgatatcacagaaattgttgatatgtttgggggat
atatcacgatatagagaacaagctaatgaaactacaaattatggtcgtgctaggagttgg
tatatgaaagctcaacaattagctcctaaaaatggccgtccatacaatcaactagctatt
ctagctctttatacaagacgaaaattagatgctgtatattattacatgagaagtttagct
gctagtaatccatttataacagctagagaaagtttgatgtctttatttgatgaggccagg
aagaagtctgaaactgtggagagaaagaagacagaagaaaaagagttgaagaaaaagaaa
atggaacagaatgagaaaactaataaacatcgtatagaaatatggatctcatcagatggc
agtagtacagaaaatcaagcagacgtagattcacaggaagaagatttgtcacaactctct
ggaatagagttgaataagagatttgtattaagttttctgatagtacatggaaaattattt
actaaaattggaatggagttatttgcagagagttgtagtcagatgttacaagagtttgat
gttttattacatcattcaccatgtgtcatcagtagtcatagattaatacagttgatggct
ataaatatgtttgctattgaaaatacagctttaaaagatgaatcactagaggatagttgt
agatcattattacaagattatgctgttcagatgggattggatatgttcggtctgttagct
acccgatgttcacagttaatggctacccacctccagtcttcagagtacccagctagtcta
atgaatgaagatttacatcagttgacacctggtctaaaagtctggactgattggatgatg
tgtcattctggtctgtggaatcctgcaccaactcctagacctcctgacgtaggaccactg
atagatccctggaaatgtacagctgatctgtgtaatatattgaaagatgttgatacatcc
catattaaactctatagacataagaaagaaaattgtgatgctattatattaaatgaagat
aatttaatggcaggatttgttcctatgctaggagcacctgtagaaagttgttttgttcat
tctactgttgataaggaaatagcgagagatgctttaaggctagagaaatttggtttattt
agtgattatctatgcggtatagaaccacctatgttatcatataatgtagaaactaaacag
tattattctatagcacccgttactgaaggagaaaatgaatctgttgatgagcaaaatgac
tattcagagtctgaagatgttattgttgaaagtgaagaagaaatagaggttattagtggg
gatgaagatcatgtccgccatcttaaagttaaacgtgaacatctgaaaaagaaagttaag
gagcaaacaaaacataaagaaaatgtcgaggctctgttagagaaagacagacataagaag
attgaattagaaattcatcccagatttttggttcctgataccaattgtttcattgatcag
tttaacaatctagcctccattttagagagtaaaaaatacaccatagttattccccttgtt
gttataaatgagttagatggactgtctaaaggaagtaaagaagctaaatatgatagtaaa
gagcacgcctccatggtacagcaacacgctaccacagctttacaatatctagaggctcaa
tttcaacgtaaacattcacatcttagagctcaaacatcaaaaggttctatcttagaaacc
atagctttcaggagtgaagaaattgatgccacggtaggttttggtaccaatgatgatctc
attctatcatgctgtttacattactgtaaagataaagctagagatttcatgcccaaagga
aaagatgcgccagttcatctatatcgtgatgtagtcttgttaacagatgatagaaatcta
cgacttaaagctcatacttgtaatgtacccgtcaaagaagttggagctttcaaaaaatgg
agccgtattagttga
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integrated database retrieval system
