Lottia gigantea (owl limpet): LOTGIDRAFT_233929
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Entry
LOTGIDRAFT_233929 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LOTGIDRAFT_233929
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lgi01007
]
LOTGIDRAFT_233929
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgi03016
]
LOTGIDRAFT_233929
Enzymes [BR:
lgi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
LOTGIDRAFT_233929
Amino acid related enzymes [BR:
lgi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
LOTGIDRAFT_233929
Transfer RNA biogenesis [BR:
lgi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LOTGIDRAFT_233929
Prokaryotic type
Other AARSs
LOTGIDRAFT_233929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
20249401
NCBI-ProteinID:
XP_009059206
JGI:
233929
UniProt:
V4AA04
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MRGYLWNGNYKLTSHFQKHYCARWKSSEHKSKRYSKTLILPKSKFNSTLRDGAAIKRELN
IQKACSFNKLYSWQRQTDRNKEFVLHDGPPYANGATHVGHAINKILKDVTNRYKLLRGYK
IHYVPGWDCHGLPIEMKALKDGKIDERTLKPLDIRNRALKFAKKAIEVQRKSFQQWGVMA
DWSEGYLTTDFSYEANQLEVFFKIYDKGLVYREFLPVYWSPSSRTALAEAELEYNEKHCS
KSVYLTLDVTEISDSIRSLTDKRIKAVIWTTTAWTIPFNQLVSYHSNIQYQLLENHNNGD
VYLCEESFSVKLSTLLGCQLKVICSFSGDNLKGTKYLQPITNEVCPFLHGDHVSSGKGTG
LVHTAPAHGHDDFEMARQYDLPIECYVDEEGKYLKETGPELKGKTIGVDAETTVVNLVKN
NIIKIEDYIHSYPYDWRTNKPVIIRASKQWFVNNKLLKDQALEWIEKIDVIPSLFKNNLR
NNIESQTYWCISRQRVWGVPIPVFYDNKTDQPIVTQESIKYICELVRNNGSDIWWKLPVE
QLAHHSLLDKFGSELIKGTDILDIWFDSGTSWASVLKDNNYEADVYYEGIDQCRGWFLTS
LLTSIAVNSKPPYKKVMIHGFATDEAGKKMSKSIGNVVDPEIVVHGGKDKNENPSYGVDI
LRWWAAQSQAKTNIMIGKNILNRITNECVFPVRKCFGFLLRNLSTFDPSTQCIEYSLLLP
QDQYMLLQLYQYGQNITRYYEESEFNKVLLETIKFVNVHFSFYSSIIKDRCYCEEKSSIK
RLSSLTVQYYMADILIRSLAPIVPHLAEEIYQHLPKHSPAESSIFKTSWFELHDEWNNTS
LQNIIKPVFDIQSDVQSVLVTEDSMEYDVVIYASHSLFEILKLFQPDEVTSSSSPLNEML
HTSHTSLLSEPPAIIPDDSQLVDGLSTVLQNGMKVPQHFKIIIMPAMKNICERCRRYTAD
HSSTPCERCLTVLAHDWAE
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgagagggtatctttggaatggaaattataaactgacatctcactttcaaaaacattat
tgtgccagatggaaatcaagtgaacacaagagtaaaagatactcaaaaacacttatttta
ccaaagtccaaattcaattctactctgagagatggagcagcaattaaaagagaattaaat
attcagaaggcatgcagcttcaataaattatattcatggcaaagacaaacagatcgcaac
aaagagtttgttttacatgatggaccaccttatgcaaatggagcaacccatgtgggtcat
gcaattaacaagattctaaaagatgttacaaatcgctacaagttattgaggggttacaag
attcactatgtgcctggctgggattgtcatggtcttcctatagaaatgaaagctttaaaa
gatggaaaaatagatgaaaggacattaaagcccttggatattaggaatagagcacttaaa
tttgccaagaaggctatagaagtacagcgtaaatcatttcagcaatggggagtgatggct
gattggagtgaaggatatttaaccactgatttttcgtatgaagcaaatcagttagaagta
ttttttaagatatatgataagggtttggtatatagagaatttttgcctgtatattggtct
ccctcttcaaggacagccttagctgaagctgaattagaatataatgaaaaacattgcagt
aaatcagtttatttaacattagatgtcacagagatatctgactctatcagatcattaaca
gataaaagaataaaagctgttatttggacaacaacagcctggaccataccatttaatcaa
cttgtttcttatcatagtaatatacaatatcagctgttagaaaatcataataatggtgat
gtttatctgtgtgaagaaagtttcagtgttaaattatcaactttactgggatgtcaatta
aaagttatttgttcattttcaggtgataacttaaaaggaacaaagtatctccagcctata
actaatgaagtatgtccattcttacatggtgatcatgtgagcagtggtaaaggtacagga
ttagttcatacagcaccagcacatggccatgatgactttgaaatggctcgacagtatgat
ttacctattgaatgttatgtagatgaagaaggaaaatatttgaaagaaacaggaccagag
ttaaaaggaaaaacaataggagttgatgcagaaacaactgtggtgaatctagtgaagaat
aatataataaagatagaagattatatacatagttatccatatgattggagaactaataaa
cctgttataatacgagctagtaaacaatggtttgttaataataaactactcaaagaccag
gctctagaatggatagagaagatagatgtaataccaagtttatttaaaaataatctaaga
aataacatagaaagtcagacatattggtgtatatctagacagagagtatggggtgttccg
attccagtcttttatgataacaaaactgatcaacctattgttacacaagaaagtattaaa
tatatatgtgaactagtgagaaataatggtagtgatatatggtggaagttaccagtagaa
caattagctcaccattctttactagataagtttggcagtgaattaataaaaggtacagat
atattagatatatggtttgatagtggtacatcttgggcttctgttttaaaagataataac
tatgaagctgatgtatattatgaaggtatagatcaatgtagaggatggtttttaacatca
ttattaacaagtatagctgtaaatagtaaaccaccatacaagaaggtgatgatacatggt
tttgcaactgatgaagcaggtaaaaaaatgtcaaaatccattggaaatgttgtagatcca
gaaatagtggtacatggtggaaaggataagaatgaaaatccgtcctatggtgtggatatt
cttagatggtgggcagctcaatctcaagctaaaactaatataatgataggaaagaatata
ttaaatagaataactaatgaatgtgtattccctgtgcgcaaatgttttggatttttatta
agaaatttatctacatttgatccttcaacacaatgtatagaatattccttattattacca
caagatcagtatatgttactacagttgtatcaatatggtcaaaatattacaagatattat
gaagaaagtgaattcaataaagtcttactggaaaccatcaaatttgtaaatgtacatttt
tcattttattcaagcattatcaaagatagatgttattgtgaagagaaatctagtattaaa
agactatccagtttaacagtacagtactatatggctgatatattaattagatcactagct
cctattgtacctcatttagctgaagagatttatcaacatctacctaaacattcacctgct
gaaagtagtatatttaaaacaagttggtttgaattacatgatgaatggaataatacaagt
ttacagaatattattaaacctgtatttgatatacagagtgatgtacagagtgttctggta
acagaagattctatggaatacgatgtagttatttatgctagtcattccttgtttgaaata
ttgaagttatttcaaccagatgaagttacatccagttcttcaccattaaatgaaatgtta
catacatcacatactagtttactatcagaaccacctgctattatacctgatgattctcaa
ctagtagacggtctttctactgttcttcaaaatggtatgaaagttcctcagcattttaaa
ataattattatgccagctatgaagaatatttgtgagagatgtagaagatatacagctgat
catagttctacaccatgtgagaggtgtctcactgttctcgctcatgactgggctgagtga
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integrated database retrieval system
