Lottia gigantea (owl limpet): LOTGIDRAFT_83266
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Entry
LOTGIDRAFT_83266 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10261
F-box and WD-40 domain protein 2
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_83266
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
LOTGIDRAFT_83266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_Gbeta
EIF3I
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
F-box-like
F-box
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
WDR54
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
F-box_4
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
20252567
NCBI-ProteinID:
XP_009056642
JGI:
83266
UniProt:
V4AGY4
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
ENFPDWLQQTCCTFMKLSNEDRNEVFDSLINVSGAEQLTHLADILPLLIYRDFLVLLPTE
LRYHVLKYLDGYNLLKCSCVSSKWNDIINNASMVWWERVQQVGAVSIVYCHKDTNKYIKL
YKQITQLFQHCACKKCFDYRNLAGHQSRVMAIQYKNGKIASGSDDHTVKIWDAHTGTLLN
TVHTHTVCDLWFDEKHVYTSSFDCTNACWEISSGAMQHQLVGHTSAIFSIDVADNHSLVL
TGSSDKSVKLWSLAELQPVLVTTLQHYHREWVTKVKFLEVNHEFNYEENVTFASVDKYQC
FIWRQQRAGEISKLHTLHSKPGSQFTNFIHHTSDGFALCTWSDTELNSYLDMYTFTDKIL
TLTRHINLSNIPQRLVRAQLLGVGLKFAVFTGSADIDTLYIYNLLLEKCVCKIPIPQCRS
TRNGSSLTLGNKEWLDGLDGSIPTGTLFAGCPQNDDICFVVNWK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gaaaattttccagattggctacaacaaacatgttgcacattcatgaaactatcaaatgaa
gataggaatgaggtgtttgattcattgataaatgtttctggagctgaacagttgacacac
ctggctgatattctccccctattgatatacagagatttcttagttttattgcccactgaa
ctcagatatcatgtattaaagtatttagatggttataatttattaaaatgttcttgtgta
tccagtaaatggaatgatataattaataatgcatctatggtatggtgggagagagtacag
caggttggagcagtgagtattgtgtactgccataaagatactaataaatatatcaaacta
tataaacaaataacacagctatttcaacattgtgcctgtaaaaaatgttttgattataga
aatcttgctggacatcagagtcgtgtgatggctatacagtataaaaatggtaaaattgct
tctggttctgatgatcatacagtgaagatatgggatgctcatactggcaccttactgaat
actgttcatacccatacagtttgtgatctatggtttgatgagaaacatgtctatacttct
tcatttgactgtaccaatgcttgctgggagattagttctggagcaatgcagcatcagtta
gtgggtcatacatcagctatatttagtattgatgtagcagacaaccatagtttggtgcta
actggatcttcagacaaatcagtgaagctatggtccttggcagaacttcaaccagtcctg
gtcacgacactacaacactatcatagagaatgggtcacgaaagtcaagtttttggaagtc
aatcatgagttcaactatgaagagaatgtgacatttgcaagtgttgataaatatcagtgt
ttcatatggaggcagcagagagcaggggagataagcaagcttcatactttacattccaaa
cctggcagccagtttactaactttatacatcatactagtgatgggtttgctctgtgcacc
tggagtgataccgagttaaacagttatttagatatgtatacatttacagacaagatatta
accctaacacgccatattaatttatccaacattccacagcgcttagtacgtgctcagcta
cttggtgtagggttaaagtttgcagtatttactggctctgctgatatagatacattatat
atttataatttattattagagaaatgtgtgtgtaaaatacctattccacaatgcaggtct
accaggaatggttcttcattaactctgggtaacaaggaatggttggatggtttagatggt
agcattcctactggtacattatttgctggttgtcctcaaaatgatgatatatgttttgtt
gtcaattggaag
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