Leguminivora glycinivorella (soybean pod borer): 125241433
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Entry
125241433 CDS
T09956
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125241433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgly03041
]
125241433
Spliceosome [BR:
lgly03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
125241433
Complex C
U5 SnRNP specific factors
125241433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
TniB
Ras
Motif
Other DBs
NCBI-GeneID:
125241433
NCBI-ProteinID:
XP_048005881
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All DBs
Position
Z:3659986..3693745
Genome browser
AA seq
974 aa
AA seq
DB search
MDGDLYDEFGNYIGPDLDSDSDDDQSVYDNREGDEDAMDDDEDADAEPEAAPMSVVLHED
KRYYPQAVEVYGPDVETVVQEEDTQALDKPLVEPVKHKKFQMQQQELLETTYDMEYLADM
LDNTNLMRNVTLMGHLHNGKTSFVDCLIRQTHPSTVNNETTIPMRYTDTLFVEQERGVSI
KAMPVTLMLKNIKGKSHLLNIMDTPGHVNFSDEVTSALRISDGAVLFVDAAEGIMLNTER
LLRHAVQERVPLTICINKIDRLMLELKLPPADAYYKLRHIIDELNSLIETNQPQDNPDEP
ATVFSPLLGNVCFASSLYDVCFTLESFAAMYAAAHPTSGLRAGDMATWLWGDVYFNTKTR
RFTKKQPHASAQRSFVEFILEPLYKIFAQVVGDVDDTLPAVLAELDIKLSKQESKLNVRP
LLRLVCSRLFGDFRGFVEMVVRHVPSPLDAAPRKVAHTYRGAEGALLEDMRTCDQSGRLV
AHTTKMYPTDDCSFFLVLARIMSGTLYAGQSVRVLGENYSTQDEEDSRIMNVGRLWIYEA
RYKVELNRVPAGCWALVEGIDQPIVKTCTFVGADETEELHTFRPLRFDTQAVVKIAVEPV
NPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRDMYSEIDIKV
ADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRRKLG
EFFQNKYDWDLLAARSIWAFGPTATGPNILVDDTLPSEVDKHLLASVKESIVQGFQWGTR
EGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVE
VQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQGQA
FCLQVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMVKTRRRKGLSEDVSINKFFDD
PMLLELARQDVQFN
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatttgtacgacgagttcgggaattacatagggccggatctggattcggat
tctgacgatgaccagagcgtctatgataaccgtgaaggtgatgaggatgccatggacgat
gatgaagacgctgatgcggaaccggaggctgctcccatgtcggtcgtgctgcacgaggac
aaacggtactatccacaagctgtagaagtgtacggtccggacgtagagacagtagtccag
gaggaagacacccaagcgctggacaagccgctggtggagccggtgaagcacaagaagttc
cagatgcagcagcaggagctgctggagaccacgtacgatatggagtacttggccgatatg
ctggacaacacgaatctgatgaggaatgttacgcttatggggcatctgcataatggaaaa
acttcgttcgtggactgtctcatccgccaaacccaccccagcaccgtgaacaatgagacc
accatcccgatgcgatacacagacaccctgttcgtcgagcaggagcgcggggtgtccata
aaagccatgccagtcacgctcatgcttaagaatatcaagggaaagtctcatctgctgaat
atcatggacaccccgggccatgtgaattttagcgatgaagtcacttctgctttgaggata
tctgatggcgcggtgctcttcgtggacgcagccgaaggcataatgctcaacacggagcgc
ctcctccgtcacgccgtgcaagagcgggtgcctctcacgatctgcatcaacaagatcgac
cgtctcatgctggagcttaaactaccgcccgctgacgcgtattacaagctgagacatatt
atagatgaattgaactcgttgatcgaaacaaatcagcctcaagacaacccggacgagccg
gctacagtcttctctcctttactgggcaacgtctgcttcgcgtcatcgctctacgacgta
tgcttcacactggagtccttcgcggccatgtacgcggccgcgcaccccacctccggcctc
cgtgccggcgacatggccacgtggctatggggcgacgtatacttcaacacgaaaactaga
agatttacgaagaaacagcctcatgcttccgcgcagcgaagcttcgtcgagttcatcctt
gagccactttacaagatcttcgctcaggtggttggtgacgtggacgacacgctgccggcc
gtgctggccgagctggacatcaagctgtccaagcaggagtccaagctcaacgtgcgcccg
ctgctgcggctcgtgtgcagccgcctcttcggggacttccgaggtttcgtagagatggtg
gtccgtcacgtgccgtctccgctcgacgcggcccctcgcaaagtggcgcacacgtaccgc
ggcgccgagggcgcgctgctcgaggacatgcgcacctgcgaccagtcgggccggctcgtc
gcgcacaccaccaagatgtatcccaccgacgactgcagcttcttcctggttctcgcgcgc
ataatgtcgggcacactgtacgcggggcagtccgtgcgagtgttgggagagaactacagc
acacaggacgaggaagactcgaggataatgaacgtggggcgactttggatatacgaagcc
agatacaaggtggagttaaatcgcgtccctgccggctgctgggccctggtcgaaggcatc
gaccagcccatagtgaagacgtgcactttcgtcggcgccgacgagacggaggagctacac
acattcaggccgctgcggttcgacacacaggcggtagtcaagatagctgtggagcccgtc
aacccttcggagctaccaaaaatgttggacgggttgagaaaggtgaacaaatcctacccc
ctgctatcgacgcgagtagaagagagcggcgaacacgtgatcctgggcacgggcgagctg
tacctcgactgcgtcatgcacgacctacgggacatgtattcggaaatagacatcaaagtc
gcggacccagtagtatccttctgcgagacggtagtcgagacatcatctctcaagtgtttc
gccgagactccgaacaaacgcaacaagctgaccatgatagcggagcctttagaacgcggg
ctcgccgaggacatcgaggcgggcgccgtctgcgtcacctgggaccggaggaagctggga
gagttcttccagaacaagtacgactgggatttgctggccgcccgatcgatctgggcgttc
ggtccaacagcgaccggccccaacattctggtcgacgacacgctgccctccgaggtcgac
aagcatctactggcgtcagtcaaagagagcatagtgcaaggtttccaatggggcacacga
gaaggcccactgtgcgaagagccgatccgcaacgtgaagttcaagattctagacgccgtc
atagcacaggagccactgcacagaggaggaggacaaatcattcccacagctagaagagtg
gcgtactcagcgttcctaatggcgacgccgcgcctcatggagccctacctgttcgtggaa
gtgcaggctcccgctgactgcgtctccgccgtgtacacagtgctcgccaagcggagaggt
cacgtaacccaagacgcgccagtacccggttcgcccctctacacgatcaaggcgttcgta
ccggctatagactcgttcggcttcgagacggatctgcggacgcacacgcagggccaggcc
ttctgtctgcaagtgttccaccactggcagatcgtgccgggagacccgctcgacaagagc
atagtcatcaggccactggagccgcagcccgccacgcacctcgcgcgcgagttcatggtg
aagacgcgccgccgcaagggcctcagcgaagacgtgtccatcaacaaattcttcgacgac
cctatgttgctcgagctggcgcggcaggacgtgcagtttaattag
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