Lysobacter gummosus: LG3211_3278
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Entry
LG3211_3278 CDS
T04163
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LG3211_3278 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_3278 (nth)
Enzymes [BR:
lgu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LG3211_3278 (nth)
DNA repair and recombination proteins [BR:
lgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LG3211_3278 (nth)
Prokaryotic type
LG3211_3278 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ALN92232
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All DBs
Position
3639164..3639820
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AA seq
218 aa
AA seq
DB search
MKPAQIQDMFARLQALNPAPTTELEYTTPYELLVAVALSAQSTDVGVNKATRKLFPIANT
PRQIAALGVEGLKPYIATIGLFNTKAANVVALSQQLLELHGGEVPRDRAALEALPGVGRK
TANVVLNTAFGEPTIAVDTHIFRVSNRTGLAPGKDVLAVEHKLLKVVPDAYLQDAHHWLI
LHGRYVCKARKPDCPHCAIRDLCRFPDKTPGEPDPVAA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgcgcagatccaggacatgttcgcgcgcctgcaggcgctcaaccccgcgccg
accaccgagctcgaatacaccacgccttatgaattgctggtcgccgtcgcgctgtcggcg
cagtccaccgacgtcggcgtcaataaagccacgcgcaagttgtttcccatcgccaatacg
ccgcggcagatcgccgccctcggggtcgaggggctcaagccgtatatcgccacgatcggg
ctgttcaacaccaaggccgcgaacgtggtcgcgctgtcgcagcagttattggaactgcac
ggcggcgaagtgccgcgcgatcgcgctgcgctggaagcattgcccggggtcggccgcaag
accgccaacgtcgtgctcaacaccgccttcggcgagccgaccatcgcggtggacacgcac
atcttccgcgtctccaaccgcaccggccttgcgccgggcaaggatgtgctcgcggtcgag
cataagctgctcaaagtggtacccgatgcctaccttcaagatgcgcatcactggctcatc
ctgcacggacgttacgtttgcaaggcacgaaaaccggattgtccgcactgtgcgatccgt
gatctttgtcgttttccggacaagacgccgggcgagcccgaccccgtagctgcttga
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