Schleiferilactobacillus harbinensis: D1010_00265
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Entry
D1010_00265 CDS
T06855
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lhb
Schleiferilactobacillus harbinensis
Pathway
lhb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1010_00265 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhb03019
]
D1010_00265 (recQ)
03400 DNA repair and recombination proteins [BR:
lhb03400
]
D1010_00265 (recQ)
Enzymes [BR:
lhb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1010_00265 (recQ)
Messenger RNA biogenesis [BR:
lhb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D1010_00265 (recQ)
DNA repair and recombination proteins [BR:
lhb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D1010_00265 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QFR21996
UniProt:
A0A5P8M0K3
LinkDB
All DBs
Position
57786..59582
Genome browser
AA seq
598 aa
AA seq
DB search
MANTEAEQLLQEKFGYDYFRTGQEQAIDRVLAGANTLVIMPTGGGKSLCYQIPALLLPGL
TVVVSPLIALMKDQVDALNDNGIPATFINSAIDFREIDERLCQAAMGEVKLLYVAPERFE
SDEFVAALNGIQISLLAIDEAHCISQWGHDFRPSYLALAAVPERLTSHPAVIALTATATP
RVAQDIRQRLGIPAAGLINTGFARDNLSFQVVRDQDEDKYLVDYLKKNPNQSGIIYVSTR
KEVDRLYTLLARKKLPVARYHAGMADMDRAASQEDFLFDRKPIMIATNAFGMGIDKSNVR
FVIHAQMPKDLESYYQEAGRAGRDGLESDAILLFKPADVQLQHFFIEQSDADEAHKHLQY
QKLQTMIQYANTDQCLQQFILRYFGQEDTKPCGRCSNCLDTREAVDVTTDAQKVLSCVVR
VHERFGKVVIAQILAGANNQRIRQWRLDELSTYGLMQHQRQKEISTFIDFLTAGGWLVTK
GGQYPTLALTQTGAAVLRGQEKVFRKTAIKARKSLPADDATFETLRQVRRQLAEDTKLPP
YMIFPDQTLKAMSNEKPQTLEEMLAIKGVGEMKLEKYGQIFLDALTAKPTVHSAGPGE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaacacagaggcagaacaactactgcaagagaaattcgggtacgattacttccgg
acgggtcaggaacaggccattgaccgggtgctggcgggggctaacacgctggtgatcatg
cccaccggcggcggcaagtcgctgtgttaccagattccagcgctgctgctgccggggttg
acggtggtggtgtcgcctttgattgccttaatgaaggaccaggtggatgcgttgaatgat
aacggcatcccggcgacctttattaatagtgccatcgattttcgggagattgatgagcgc
ctgtgccaagcggccatgggtgaagtgaagctgctctacgtggccccggaacgctttgag
tccgatgagttcgtggcggcgttgaacggcattcagatcagcctgctggcgattgatgag
gcccactgtatttcccagtggggccacgatttccggcccagttatttggcgctggccgcg
gtgccggaacggcttaccagccatccggcggtaatcgcgctgacggccaccgccacaccg
cgggtggctcaggatattcgccagcggctggggattcctgcggcgggcttgatcaatact
gggtttgcccgggataacttgagctttcaggtggtgcgggatcaggatgaagataagtat
ctggtggactatttaaagaaaaacccgaatcaatccgggattatttatgtgagtacacgg
aaagaagttgatcggctctacacgctgctcgcccggaagaaattgccggtggcccggtac
catgctggcatggctgatatggaccgggcagccagccaagaagacttcttattcgaccgc
aaaccgattatgatcgcgaccaacgcgtttggcatgggtattgataagagcaacgtgcgt
ttcgtcatccatgcgcaaatgcccaaagacctggaatcctactatcaggaagctggccgg
gccgggcgggatgggctagagagtgacgctattttgctgttcaaaccggcggacgtgcaa
ctgcagcatttcttcattgaacaatctgatgccgacgaggcccataagcacctgcagtat
caaaaattgcagacgatgattcagtacgcgaataccgaccagtgcctgcaacagtttatt
ctgcgttatttcggtcaagaggatactaaaccttgcggccggtgcagcaattgtttggat
actcgggaagcggtggacgtgaccacggatgcccagaaagtgctgtcctgtgtggtccgg
gtgcacgaacggtttggcaaagtcgtgatcgcccagatcctggcgggggctaacaaccag
cgtatccgccagtggcgcttggatgagctgtcgacttatggactcatgcagcatcaacgg
caaaaggagatcagtacgttcatcgacttcttaacggctgggggctggctggtcactaag
ggcggccagtatccaacactggcgctgacccaaacgggggctgctgtactgcgcgggcag
gagaaggtgttccgtaagacggccatcaaagcccgaaagagcttgccggctgatgacgct
acctttgagacgctgcgccaagtccgccggcaactggcagaagacaccaagctgccgccg
tacatgatcttcccggaccaaacgctgaaggcgatgagcaacgagaaaccgcagacctta
gaagaaatgctggccatcaaaggtgtcggcgaaatgaagctggagaaatacggtcagatt
ttcttagatgccctaaccgctaagccgactgtgcactcagctggtccaggtgaatga
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