Schleiferilactobacillus harbinensis: D1010_00970
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Entry
D1010_00970 CDS
T06855
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lhb
Schleiferilactobacillus harbinensis
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhb03400
]
D1010_00970
DNA repair and recombination proteins [BR:
lhb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D1010_00970
Archaeal homologous recombinant proteins
D1010_00970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
AAA_15
G-alpha
NAAA-beta
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QFR22129
UniProt:
A0A5P8M0Z2
LinkDB
All DBs
Position
187922..191098
Genome browser
AA seq
1058 aa
AA seq
DB search
MIPLTLHVHNFGPYVDETLDFQRFAEVPLFLISGKTGSGKSTLFDAMRFALYGDTVVDSG
EREGAALRSNFADETEPSRVVFTFTQNDLRYVVSREPKQTLKKKRGEGYKTYNATAKLAI
YHGDEQKNEFTKTRDVDTHLQDLLGLTAEQFTQIVLLPQGEFRKFLNADSNEKESVLRQL
FGTGKYQRWGEIIRQHAQSAQSAASHVDEQLSGVLGQLPWPDTMVDDVTPYLTSPLNYQT
QWTQFLADLADTQQSAEQTAKTAQQAAQKTLAAAQEALHAGQDLTTQYQNAAALQGQQAQ
LTSQQPAMTDLAGHIAQLEFSQTVRPAAQQITDGQDHQRQAAAAEKKAQAQLVQAQAALQ
QADEQLAALTAQQPAIDQAKQQAAKLTDLLPQFEKVANARKAAAKAEKVFAAAQAAVTAQ
NKALQEQQMALQQAQTTAAQQPALLTQQNQLDGQKHDLALAEEHLQTVRQHWQTWQQAAG
QAAALADQVQAAAQRSEQAEAAYRQTKSDWSAGQIARLSQDLIPGTPCPVCGSTEHPHPA
ASTVTTLVSDAALDQAEKAWQRASAQAAELTSQQRQLTAQTAELADQLAAVWRIYQPAAE
TPVAWADTLTAEQQRLAAARTDLTAAQKKTQQALRAATAASQQVDQRQRALVAGQTELTT
AQTAANTADKVMAQAQTALTDAQSQLPADYPTAAALQQAITTLQNQAAAHDQALKAAQQT
KETQHTQVTTLTTRITTGQQDQTDWAQRVAAYQKQLTTALAAHTPAVTAAELPALFAELP
QLAVLRQKYTAYQTSVTTVAAQLAQVTAAIAERPRPDVAALQTAAAAAQTQTDAANHAVY
EAQTALAQTQAAQKQMTKLVKDQADQAAIAREWAQLSETVNGKGAIKLSLERYVLRAYLQ
EVLRVANSRLARLTNGRYELQLHRENGAYATNTGLELDVYDDNVGATRSVHTLSGGESFL
TALSLALALGEVVQNESGGIQINALFVDEGFGSLDEDALAGAIDALQSIEGQQRLIGIIS
HVRELRQQIPDQLWVETEGDGRSRLHYPSSSEIEAKAL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgattccgttaaccttgcacgtgcataattttggtccgtatgtggatgaaacgttggat
ttccagcgcttcgcggaggtgcccctgtttttgatcagcggcaaaaccggcagtgggaaa
tcgaccttgtttgacgcgatgcgctttgccttatacggcgataccgtcgtggacagcggt
gaacgggaaggggccgctctgcgcagtaattttgcggatgaaacggaaccgtctcgggtg
gtgttcacgtttactcagaatgatttgcgttatgtggtcagccgggaaccgaaacagacg
ctaaagaagaagcggggcgaagggtataagacctataacgccactgctaagctggctatc
taccatggtgatgaacaaaagaatgaattcactaagacccgggacgtggatacccacctt
caggatttactgggtttaactgcggagcaattcactcaaattgtattattgccccagggc
gagttccgaaaatttctcaatgcggatagtaatgaaaaggaaagtgttctgcgtcagctg
ttcgggaccggcaagtatcagcgctggggggagatcattcgccagcatgcccagagcgcg
caaagtgctgccagtcacgtggacgagcagctcagcggcgtgttgggccaattgccttgg
ccagacaccatggtagatgacgtaacaccatacttgaccagcccattgaattatcagact
caatggacgcaattcttagctgatctcgcggatactcagcaaagcgccgagcaaacagcc
aagaccgcgcaacaggctgcgcaaaagacgctggccgcggcccaagaggcattgcacgcc
ggccaagatttgacgacacagtatcagaatgctgcagccttgcaggggcagcaagcccag
ctgaccagtcagcagccggccatgacggatttggcgggccatattgcccaactggaattc
agtcaaaccgtccggccggcagcccagcagatcactgatggtcaggaccaccagcggcag
gcggcggcggcagaaaaaaaggcccaggcgcagctggtccaggcccaggccgcgttacag
caagccgatgagcagctcgccgcgctgacagcgcagcagccagccattgatcaggctaaa
cagcaggcggcgaagctcactgatttgctgccccaatttgaaaaagtggcaaacgcacgc
aaagccgccgctaaggcagagaaggtgtttgccgccgcccaggccgcggtcacggcgcag
aacaaagccttgcaggaacagcaaatggcattgcagcaggcccagaccaccgccgcgcag
cagccggcgttattgacccagcagaatcagctggatggtcaaaaacacgatttggccttg
gccgaggaacatctgcagacggtgcgccagcactggcagacttggcagcaggccgctggt
caagccgccgctttggccgaccaagtgcaagccgcggcgcagcgatccgaacaggcagaa
gcggcttaccggcaaaccaagagcgactggtccgcaggacaaattgcgcggctgagccaa
gacctgataccggggacaccatgcccggtatgcggcagtacggaacacccccatccggca
gcgagcacggtgaccacgctggtcagtgatgcagcgctggaccaggcggagaaggcgtgg
cagcgggccagcgcccaagcagccgagctgaccagtcagcaacggcaattgaccgcccag
acggccgaacttgctgaccaattggcggcggtctggcggatttatcagccggcggcagaa
acgcccgttgcgtgggcggacactttgaccgccgaacagcagcgcttggcagcggcgcgg
acggatctgactgcggcccaaaagaagacccagcaggcgctccgcgccgcgacagcagcc
agtcagcaggtcgaccaacgccagcgggcactcgtcgcgggccaaactgaattgacgacg
gcccagacggcggcgaacaccgccgataaagtgatggcccaggcccagaccgcgttaacg
gatgcccagagccaattgcccgcggattatccgacggcggcggctttgcaacaggccatt
acgacgctgcagaaccaagcggcggcccatgaccaggccctcaaggccgcccagcaaacg
aaagaaacccagcacacccaggtcacgaccttgaccactcgaatcaccactggccagcag
gaccagactgattgggcccagcgggttgcggcttatcagaagcagttaacgacggctttg
gcggcccatacaccagcggtgaccgccgccgagttgccggctttgtttgctgaattgccg
caactggccgtgctgcggcaaaaatacacggcgtaccagaccagcgtgacgaccgtcgcg
gctcaattggcccaagtgacggccgccattgccgagcggccgcgacccgatgtcgccgcg
ctgcaaaccgcagcagcggccgcccagacccagaccgatgccgctaatcacgcggtgtat
gaagcccagacggcgctggcccaaacccaggccgcccaaaaacaaatgaccaagctggtc
aaagaccaggccgatcaagcggccattgcgcgggaatgggcccagctcagcgaaaccgtc
aacggcaagggggccatcaagcttagtctggaacggtatgtactgcgagcttatctgcag
gaagtcctgcgggtggccaacagccggctggcccgtctgaccaatggccgctatgaactg
cagctgcaccgcgagaacggagcgtacgccacaaatacgggcttagagctggacgtctac
gacgataatgtcggcgccacgcgcagtgtgcacaccctgtccggcggcgagagtttctta
accgccctgagtctggcgttggctctgggcgaagtggtgcaaaacgaaagcggcgggatt
cagatcaacgcgctgtttgtcgatgaaggattcggttcgctggatgaggatgccctggcc
ggagcaatcgatgcactgcagtccattgaaggccagcagcggctgatcggtattatttcc
cacgtccgcgaactgcgccagcagattccagaccagctctgggtcgagaccgagggcgat
ggccgcagtcggctgcactatcccagcagcagtgagatcgaggcgaaggccttatga
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