Schleiferilactobacillus harbinensis: D1010_03005
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Entry
D1010_03005 CDS
T06855
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K03701
excinuclease ABC subunit A
Organism
lhb
Schleiferilactobacillus harbinensis
Pathway
lhb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1010_03005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhb03400
]
D1010_03005
DNA repair and recombination proteins [BR:
lhb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1010_03005
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D1010_03005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
UvrA_DNA-bind
SMC_N
nSTAND1
DnaJ_CXXCXGXG
AAA_15
AAA_29
AAA_23
DUF4350
Anti-TRAP
AAA_25
DUF463
cobW
Motif
Other DBs
NCBI-ProteinID:
QFR25151
UniProt:
A0A5P8MB50
LinkDB
All DBs
Position
complement(626224..628743)
Genome browser
AA seq
839 aa
AA seq
DB search
MTADVRKTRSYCCSRGRVHNLRNIDVDIPLNAFTAIAGLSGSGKSSLAMGILYAESSRRY
LDALSTYTRRRISQVGRADVTAVHHIPAAIALRQRPNVPNERSTVGTMSESLNVLRLMFS
RIASHRCPNGHQLPPSIKIAQAAAVTGEHMGEITCPICGVTFRPPSAEDFAFNSTGACPT
CGGTGVLRQLVPERLIPDPTKTIDEGAVASWRLPGRNFMPDVARAIGVRTDVPFDHLTKK
EQHTVLHGAKKGYPVDLPSANGRVFHMNNALFENAYNAVEDTAAKATNERTLARLDRFYA
MTVCPTCHGSRFNPKLFTALINGQNIAQISHLTLSQLQHWNDELADTYDTEMRALVKNLS
RELRGSLKPLLDLGLDYLTLDRAGNTLSTGELQRLQLGRTLRSETNGVLYVLDEPSVGLH
PANVAGLVGIIQKLIALGNTVVVVDHDTNLLNAADYMVEMGPGAGQDGGTVIAHGSLNQV
AASKASHIAPFLTGQAPVIVRQQTAPDQLTVHGTIHLAINDYNNLHGVTIDLPKRRLIGI
SGFSGAGKTSLILDSLIPAIKAQRKHEPLPRQVTALTAKGIRRVVSVNSVPVGKNARSTV
ATYSGIFDHIRALFAQTPAAQAKGWDAGHFSYNTEGGVCPNCGGTGTISLDIQYLPDMVE
TCPVCHGKRYNPETLAVQWHGLSIADVLDLSIRDALPLFQDDPAIAAILQHLADMGLGYL
VLGESTPAISGGEAQRLKLVTEMGRNQKSSLFVFDEPSVGLHPEDVRTLLKVFESLREQG
ATIIYIEHDLDMLANADYLVDLGPRGGDAGGKIIAAGTPQQVAKTPASITGRYFAKHLH
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
attactgctgatgtcagaaaaaccagatcatattgctgttcgcggggccgggtgcacaac
ctgcggaatattgatgtggacattcccttgaatgccttcaccgccatcgctggactctcc
gggtccggcaaatcgtcgctggccatgggcattctatatgctgagagctcgcggcgttat
ttagacgccctgtcaacgtatacccgccggcgaatcagccaggtgggccgggcagacgtc
actgctgtgcaccatatcccagcagccattgccctgcgtcaacggcccaacgtacctaac
gaacgctccaccgtgggcaccatgagcgaaagcctgaacgtgctgcggttgatgttttcc
cggatcgcgtcccatcgctgtcccaacggccatcagctgccgccgagtattaagattgcc
caggcggccgcagtgaccggtgaacacatgggcgagatcacctgtcccatttgcggcgtc
acgtttcggccgccttccgccgaggacttcgccttcaattcaacgggcgcttgtcccact
tgcggcggcactggggtgctgcgccagctggtgccggagcggctgattccggatccgacc
aagaccattgatgagggcgctgtggcctcttggcgcttgcccggccgcaactttatgccg
gacgtcgcccgggccatcggcgtgcgtactgatgttccgtttgatcatttgacgaagaaa
gaacagcacaccgttctccatggggcgaaaaaaggctatccagtggatctgcccagcgcc
aacggacgggtgttccacatgaacaatgccttgttcgaaaacgcctacaatgcggtggaa
gacactgcagcgaaggccaccaacgagcgtaccttggcccgcttggaccggttttacgca
atgaccgtatgcccgacctgtcacggcagccgtttcaatcccaagttgttcaccgctttg
atcaacggccaaaatattgctcagatcagtcatctcaccctgagccagctgcagcactgg
aacgatgaactcgcggatacatacgataccgaaatgcgggcgctggtcaaaaatctcagc
cgagagctgcgcggatctttaaagcccttgctggatctcggtctggattacctcaccctg
gatcgggcgggcaacaccctgtcgactggggaattgcaacggctccagctgggccgcacc
ctgcgcagcgaaaccaacggcgtcctctacgtcttggacgaacccagtgttggcctgcac
cccgccaacgtggccgggctggtgggcatcattcagaaactgattgccctgggcaacacc
gtggtggtggtcgatcacgacacgaatctgctcaatgcagctgactacatggtggaaatg
ggccccggggccggccaagacggcggcacggtgatcgcccatgggtcgctgaaccaagtg
gcggcgagcaaagcgtctcatatcgcgcccttcttaacgggccaagcaccggtgatcgtg
cgccagcagaccgccccggaccagttaacggtccacggcacgattcacttggcgatcaac
gactacaacaatctccatggggtcaccattgatctgcctaagcgccggctgatcggtatc
tccggtttctccggggccggcaagacgtcgctgatcctggatagtctgatccccgcgatc
aaagcccagcgcaagcacgagccgctgccccgccaagttacggcattgaccgccaagggc
atccgccgtgtcgtcagcgtgaactccgtacccgtaggcaagaatgcccgctccactgtg
gccacctattccggtatcttcgaccatatccgagcgctctttgcgcaaacacccgcggcc
caggccaagggctgggatgcgggccacttctcctacaacacagagggcggcgtttgtccc
aactgcggcggtacagggacgatttctttggatatccagtacctgccggatatggttgaa
acctgcccagtttgccacggtaaacgctataatccagaaaccctggcggtgcagtggcat
ggcctgagcatcgccgatgtgctggatctgtcgatccgcgacgcgctgcccctgtttcaa
gacgatccggcgatcgccgcgattctgcagcatctggccgatatgggactgggctatctg
gtcttaggcgaaagtaccccggccatctccggcggcgaagcccagcggctgaagctggtc
accgaaatgggccgcaaccaaaagagcagcctctttgtcttcgacgaacccagtgtcggc
ttgcatccagaggacgtccggaccctgctcaaagtattcgaatcattgcgggaacaaggt
gcgacgatcatttacatcgaacatgatctggatatgctggccaacgccgactatctggtg
gatcttggtccccggggcggcgatgcaggcggtaaaatcatcgcagccggcaccccgcag
caggtcgccaagacgccagccagtatcaccggccggtatttcgcgaagcacctgcattaa
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