Schleiferilactobacillus harbinensis: D1010_04270
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Entry
D1010_04270 CDS
T06855
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lhb
Schleiferilactobacillus harbinensis
Pathway
lhb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D1010_04270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhb03021
]
D1010_04270
03400 DNA repair and recombination proteins [BR:
lhb03400
]
D1010_04270
Enzymes [BR:
lhb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D1010_04270
Transcription machinery [BR:
lhb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D1010_04270
DNA repair and recombination proteins [BR:
lhb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D1010_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QFR22717
UniProt:
A0A510TWN3
LinkDB
All DBs
Position
862599..863537
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITKVDETTNYGEFVVEPLERGYGTTLGNSLRRVLLSSLPGAAVSSVQIDGVL
HEFSTIDGVLEDVTQIILNIKKLALKLNTDTEKTVEIDAEGPTTVTAANIITDDDVEILN
PEQYICTIADGGHFHMRMTIKSGRGYVPADQNKSEDMPIGVLPVDSIFTPIERVNYQVES
TRVGKRNDFDKLTLAVWTNGSIGPREAISLAAKILTEHLAGFVNLTDEAKNAEVMVQKEE
NHKEKMMEMTIEELDLSVRSYNCLKRAGINTVQELTNKTEADMMKVRNLGRKSLEEVKSK
LAALGLSLKSAD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatttgaaaagccgaatattactaaggtcgacgaaactacgaattatggggag
tttgttgtcgaacctctggaacgtggttacggcacaacccttggtaattcgttacggcgc
gtccttttgtcctctcttcccggcgcagctgtgtcgagtgttcaaattgatggcgtactg
cacgagttctccaccattgatggggttcttgaagacgttactcaaatcattttgaacatt
aagaagcttgccttgaaactgaacaccgacactgaaaaaacggtggagattgatgcagag
gggccgacaactgttaccgccgcaaatatcatcaccgatgacgatgtggagattctcaat
ccggaacagtacatttgcacgattgccgatggcggccatttccatatgcgcatgaccatc
aagagcggtcgcggctatgtaccggctgatcagaacaagagtgaagatatgccaattggt
gtattgccggtggattctatttttaccccgatcgaacgtgttaactaccaagtcgagagt
acccgggtgggtaaacgcaacgacttcgataagttaacgctggcggtatggacgaacggt
tcaatcggtccccgtgaagcgatctccctggcggctaagatcttgacggagcatctggct
gggttcgtcaatttgacggacgaagcaaagaacgccgaagtcatggtccaaaaggaagaa
aaccacaaagagaaaatgatggagatgaccatcgaagagttagatctctccgtacgctcc
tacaattgtctcaaacgggccggtatcaacacagttcaagagctcaccaacaaaactgag
gccgatatgatgaaggtccgcaacttgggccgcaagtcattggaagaagttaaatccaag
ctggctgctttaggcttgtccttaaagagcgccgactaa
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