KEGG   Schleiferilactobacillus harbinensis: D1010_05115
Entry
D1010_05115       CDS       T06855                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lhb  Schleiferilactobacillus harbinensis
Pathway
lhb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lhb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D1010_05115 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lhb03019]
    D1010_05115 (rny)
Messenger RNA biogenesis [BR:lhb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     D1010_05115 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B FBF1 KH_2 KH_NusA_C FUT8_N_cat
Other DBs
NCBI-ProteinID: QFR22871
UniProt: A0A5P8M422
LinkDB
Position
1035616..1037199
AA seq 527 aa
MELWIPIILAVIMCVVGFVAGYLTKKAAHQRAVNDAHTNAAGIIASAKRDAAAIKREADT
AKKEQLLAAKDEAHRYRAEQEAELKSRREELQKQENRLLQREDSLDHKDDILNNKEGSLD
KREDKLAQQQQQIDEAKQKVTDTLQAQEDELARIAQFTRDDARQEILDSTKEELTHERAA
LIRESEQTAKEEAEHKAKDLIAQAIQRSAADVVTETTVTVVSLPSDDMKGRIIGKEGRNI
RTLETLTGIDLIIDDTPEAVVLSGFDPVRREIARIALEKLIADGRIHPARIEEAVEKARK
EMDARIREIGEQASFELGIHHMHPDLIKLVGWMHFRTSYGQNVLNHSIEVAKLAGILAGE
LGEDVTLAKRAGLLHDIGKAIDHEVDGSHVEIGVELAKKYHESPTVINTIASHHGDVEPQ
SIIAVLVAAGDAISAARPGARSESLENYIHRLEKLENITNSFPGVDHSFAIQAGREVRVI
VAPNQVTDDQAAILAHEIRLRIEKELEYPGHIKVTVIRETRFIETAK
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggaactttggattccaataatcctcgccgtcatcatgtgtgttgttggttttgttgct
gggtatttgaccaagaaagccgcgcatcagcgggcagttaacgatgcccatacgaatgcc
gcggggatcattgcgagtgccaagcgggatgccgccgccattaagcgggaggcagacacc
gctaagaaggaacaactcctcgccgctaaagatgaagcccatcgctaccgcgcagagcag
gaagcggagctgaagagtcggcgcgaggaattacaaaagcaagaaaatcggttgctgcaa
cgggaagactccttggaccacaaagacgacattctgaacaataaggaaggcagtctggat
aaacgtgaggacaaactggcgcagcaacagcagcagatcgatgaagccaaacaaaaagta
acagatacactgcaagctcaagaagatgaactggcccgcatcgcccaatttacccgggat
gatgctcgtcaggagatccttgattccactaaagaagaattgacccatgaacgcgcggct
ctgattcgcgaaagcgagcagaccgccaaagaagaggcggagcataaggccaaagaccta
attgcccaagccattcaacgcagcgcggcagatgtggtgacggaaactactgtcactgtt
gtatcgctgccgagtgacgacatgaaaggccgcattattggtaaagagggccgtaatatc
cggactttggagacattgaccggaattgacctgattatcgatgatacacctgaagctgtt
gtgttgtccggatttgaccccgttcgtcgggagatcgcccggatcgcactggagaaactc
atcgctgacggccggattcatccggcccggatcgaagaagcggtggagaaagcccggaaa
gaaatggatgcccggatccgcgaaatcggtgagcaggcgtcatttgaattgggcattcac
cacatgcatccggatctgatcaaactggtggggtggatgcacttccgcaccagttatgga
caaaacgttctcaatcattcgattgaagtggcaaagctggccggtattttggctggtgag
cttggtgaagatgttaccctggctaaacgcgcaggattattacacgatattgggaaggcc
attgaccatgaggttgatggctcccatgtggagattggtgtggaactcgccaagaagtat
cacgagtcccctacagtgatcaacaccattgcgtcccatcatggggacgtggaaccgcag
agcatcattgctgtactggtcgcggctggcgatgccatttcagccgcccggccaggggcc
cggtctgaatcgctggagaattatatccatcggttggagaagctggagaatattactaac
agcttccctggcgtggatcacagcttcgccattcaagccggccgtgaagtccgagtcatt
gtggcccccaatcaggtcactgatgatcaggcggccattttggcccacgagatccgcttg
cggattgagaaagagctggaatatccaggtcatatcaaggtaacggtcattcgggaaacc
cgatttatcgaaactgctaagtag

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