Schleiferilactobacillus harbinensis: D1010_05115
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Entry
D1010_05115 CDS
T06855
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lhb
Schleiferilactobacillus harbinensis
Pathway
lhb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1010_05115 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhb03019
]
D1010_05115 (rny)
Messenger RNA biogenesis [BR:
lhb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D1010_05115 (rny)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
FBF1
KH_2
KH_NusA_C
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
QFR22871
UniProt:
A0A5P8M422
LinkDB
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Position
1035616..1037199
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AA seq
527 aa
AA seq
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MELWIPIILAVIMCVVGFVAGYLTKKAAHQRAVNDAHTNAAGIIASAKRDAAAIKREADT
AKKEQLLAAKDEAHRYRAEQEAELKSRREELQKQENRLLQREDSLDHKDDILNNKEGSLD
KREDKLAQQQQQIDEAKQKVTDTLQAQEDELARIAQFTRDDARQEILDSTKEELTHERAA
LIRESEQTAKEEAEHKAKDLIAQAIQRSAADVVTETTVTVVSLPSDDMKGRIIGKEGRNI
RTLETLTGIDLIIDDTPEAVVLSGFDPVRREIARIALEKLIADGRIHPARIEEAVEKARK
EMDARIREIGEQASFELGIHHMHPDLIKLVGWMHFRTSYGQNVLNHSIEVAKLAGILAGE
LGEDVTLAKRAGLLHDIGKAIDHEVDGSHVEIGVELAKKYHESPTVINTIASHHGDVEPQ
SIIAVLVAAGDAISAARPGARSESLENYIHRLEKLENITNSFPGVDHSFAIQAGREVRVI
VAPNQVTDDQAAILAHEIRLRIEKELEYPGHIKVTVIRETRFIETAK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaactttggattccaataatcctcgccgtcatcatgtgtgttgttggttttgttgct
gggtatttgaccaagaaagccgcgcatcagcgggcagttaacgatgcccatacgaatgcc
gcggggatcattgcgagtgccaagcgggatgccgccgccattaagcgggaggcagacacc
gctaagaaggaacaactcctcgccgctaaagatgaagcccatcgctaccgcgcagagcag
gaagcggagctgaagagtcggcgcgaggaattacaaaagcaagaaaatcggttgctgcaa
cgggaagactccttggaccacaaagacgacattctgaacaataaggaaggcagtctggat
aaacgtgaggacaaactggcgcagcaacagcagcagatcgatgaagccaaacaaaaagta
acagatacactgcaagctcaagaagatgaactggcccgcatcgcccaatttacccgggat
gatgctcgtcaggagatccttgattccactaaagaagaattgacccatgaacgcgcggct
ctgattcgcgaaagcgagcagaccgccaaagaagaggcggagcataaggccaaagaccta
attgcccaagccattcaacgcagcgcggcagatgtggtgacggaaactactgtcactgtt
gtatcgctgccgagtgacgacatgaaaggccgcattattggtaaagagggccgtaatatc
cggactttggagacattgaccggaattgacctgattatcgatgatacacctgaagctgtt
gtgttgtccggatttgaccccgttcgtcgggagatcgcccggatcgcactggagaaactc
atcgctgacggccggattcatccggcccggatcgaagaagcggtggagaaagcccggaaa
gaaatggatgcccggatccgcgaaatcggtgagcaggcgtcatttgaattgggcattcac
cacatgcatccggatctgatcaaactggtggggtggatgcacttccgcaccagttatgga
caaaacgttctcaatcattcgattgaagtggcaaagctggccggtattttggctggtgag
cttggtgaagatgttaccctggctaaacgcgcaggattattacacgatattgggaaggcc
attgaccatgaggttgatggctcccatgtggagattggtgtggaactcgccaagaagtat
cacgagtcccctacagtgatcaacaccattgcgtcccatcatggggacgtggaaccgcag
agcatcattgctgtactggtcgcggctggcgatgccatttcagccgcccggccaggggcc
cggtctgaatcgctggagaattatatccatcggttggagaagctggagaatattactaac
agcttccctggcgtggatcacagcttcgccattcaagccggccgtgaagtccgagtcatt
gtggcccccaatcaggtcactgatgatcaggcggccattttggcccacgagatccgcttg
cggattgagaaagagctggaatatccaggtcatatcaaggtaacggtcattcgggaaacc
cgatttatcgaaactgctaagtag
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