Schleiferilactobacillus harbinensis: D1010_06035
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Entry
D1010_06035 CDS
T06855
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lhb
Schleiferilactobacillus harbinensis
Pathway
lhb03030
DNA replication
lhb03430
Mismatch repair
lhb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1010_06035 (dnaX)
03430 Mismatch repair
D1010_06035 (dnaX)
03440 Homologous recombination
D1010_06035 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhb03032
]
D1010_06035 (dnaX)
03400 DNA repair and recombination proteins [BR:
lhb03400
]
D1010_06035 (dnaX)
Enzymes [BR:
lhb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1010_06035 (dnaX)
DNA replication proteins [BR:
lhb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D1010_06035 (dnaX)
DNA repair and recombination proteins [BR:
lhb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D1010_06035 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
AAA_5
AAA_19
Rad17
TIP49
AAA_16
AAA_assoc_2
AAA_7
AAA_24
AAA_18
AAA_14
Mg_chelatase
PIF1
AAA_28
DUF815
bpMoxR
Cytidylate_kin
RNA_helicase
AAA_2
Motif
Other DBs
NCBI-ProteinID:
QFR23035
UniProt:
A0A5P8M440
LinkDB
All DBs
Position
1201601..1203448
Genome browser
AA seq
615 aa
AA seq
DB search
MAYQALYRVWRPQRFADLVGQETVTQTLKNALITDQISHAYLFTGPRGTGKTSAAKILAK
AVNCRYREDGEPCNKCETCQAITAGRLGDVIEIDAASNNGVDEIRDIRDKAKYAPTVADY
KVYIIDEVHMLSTGAFNALLKTLEEPPAHVIFILATTEVQKVPATIISRTQRFDFKRIAT
ETIVARMQYILKDMQITFDDAALELIANAAAGGMRDALSILDQVLSFGADHVTLANALTV
TGSLSGDTLTKYLRAVNAGETGNGLTIVQTELAAGKDPNQFITNLLIFLRDLLLYRQDPH
LARSFYATQDPAAFAELIKQIDDTRVYQMIDVLTDVQEQLRQTTHPDVYLDVLTVKLATL
SQTVAGPAAAPAPAAQSAPAPEALTETIKSLEQQVAALQQAAKGGAAPAAGPAAAVKRKA
PQRHTKVHVNLEEINTVLGQATRQNLANLQSIWGDLLNMLDVGQRAMLHVGTKPVAASPE
AVVVSFDYPMMFERVAKDQVLREQVEADLNKLAGNPMHVYFVPKEQWPQIRKNYLLAHPV
GKQKSGRPAPGDAPTSAAASPATASAAPAAAPANPLVDKAKALFGSFVEVDNGSSKQTAS
SDNNQKQTDGVKTNG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaggcgctgtatcgggtgtggcggccccagcgattcgctgatctcgtgggg
caggagacggtgacccaaacgctgaaaaatgcgctgatcaccgatcaaatcagtcatgcc
tacctatttaccggaccccgcgggaccgggaagacgtccgcggcaaagatcttagctaaa
gcggtcaattgccggtatcgagaagacggagagccttgcaacaagtgcgagacctgtcag
gccatcaccgccggccggctgggtgacgtcatcgaaattgacgcggcctcaaataacggc
gtggacgaaattcgggatatccgggacaaggccaagtacgctcccactgtggccgactac
aaagtgtatattattgacgaagtgcacatgctgtcgaccggggcctttaatgccctgctc
aaaaccttggaagaaccgccggcgcatgtgatttttattttagccaccaccgaagtgcaa
aaagtgccggcgacaatcatttcccggacccagcgcttcgactttaagcggatcgccacc
gagaccatcgtggcccggatgcaatatattttaaaggatatgcagatcacctttgacgac
gcggccttagaactgattgccaacgcggcggccggcgggatgcgggatgcactgagtatt
ttggaccaagtcctctcctttggtgccgaccacgtgacgctagccaatgcgctcaccgtc
accggctccttgtctggcgatacgctgacgaagtatttgcgggcggtcaacgctggcgaa
acggggaatggtttaacgatcgtccaaacggagctggccgcggggaaagacccgaatcag
ttcatcacgaacctgctgatttttctgcgggatctgctgctgtaccggcaggatccccat
ttggcccgcagtttctacgcgacccaggatccggccgcctttgccgagctgatcaaacaa
attgacgatacgcgggtctatcagatgatcgacgtgctgacggatgtgcaggaacaatta
cgccaaacgactcatccagatgtctatttggatgtactgacagtgaaattggcgaccctc
agccagaccgtcgctgggccagcggcggccccggccccggcggctcaatcggcacccgcg
ccagaggcgcttactgagacgatcaaatcccttgaacagcaagtggcggccttgcagcag
gcagcgaagggcggcgcggcgccggctgctgggccagcggcggccgttaagcgcaaagcg
ccccagcggcataccaaggtccatgtgaatctggaagagatcaacacggtcctggggcag
gccactcgtcagaatctggccaacttgcaatcaatatggggcgatctgctgaatatgctg
gatgttggccagcgggcgatgctccatgtgggtaccaaaccggtggccgccagtcccgag
gcggttgtggtatcctttgattatccgatgatgtttgagcgagtggccaaggatcaagtc
ttgcgggaacaagtcgaggccgatttgaacaaattggctggcaatccgatgcacgtctac
ttcgtgcccaaagaacaatggccgcagatccgtaagaattatttgctggctcatccggtg
ggcaagcaaaagtccggccggcctgctcccggtgacgccccgacgtcagcggcggccagc
cccgcgacggccagtgctgcccccgcggcggcgccagccaatcccctggtggacaaagcc
aaggccttgttcggcagttttgtggaagtcgataatggttcaagcaaacagacagcatcc
tcagacaataaccaaaaacaaacagatggagtgaagacaaatggctaa
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