Schleiferilactobacillus harbinensis: D1010_07010
Help
Entry
D1010_07010 CDS
T06855
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lhb
Schleiferilactobacillus harbinensis
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhb03019
]
D1010_07010
Messenger RNA biogenesis [BR:
lhb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D1010_07010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QFR23171
UniProt:
A0A5P8M4Z5
LinkDB
All DBs
Position
1347222..1348178
Genome browser
AA seq
318 aa
AA seq
DB search
MTKLLKDFQPNEQLDIPVLIKSADVREAKDGSKYIALVFTDTSGEITAKLWHAAEKATQD
FTTGTVVQLTGKREVYQDRPQIRIKHMRVLPESEQDPHAYTPTAPESIEDLQAFVKQTIA
EIQQPVWRGIVQYIFGAHWHEFFTYPAAKTNHHAYEGGLAFHTVSMVRLAQKIAPLYHKV
NEDLLLAGTLLHDMGKTRELTGPTATQYRPEGNLIGHVVMIDEEIIRACDKLQLDSHSEA
VMLLRHMVLAHHGELDYGSPVRPQLIEAELLHQIDQMDASLTMITMALDDTKPGEYSERV
FGLDNRRFYQSKPIDDQG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattactcaaagattttcaacccaacgaacaactcgacatcccggttttgatc
aagtccgccgacgtgcgggaggccaaggacggcagtaagtacattgctctggtcttcacg
gatacgtcgggggaaatcacggctaagctgtggcatgcggcggagaaggccactcaggac
ttcacaacggggaccgtggtgcagctgaccggcaaacgggaagtctaccaagatcggccg
caaattcggatcaaacacatgcgggtcttgccggaatcggaacaagatccccacgcctat
acgcccacggcgccggagagtatcgaggatctgcaagccttcgtgaagcagacgatcgcc
gagatccagcagccagtatggcgggggatcgtccaatatatatttggggcccactggcat
gaatttttcacctacccggcggccaagaccaaccaccatgcttacgagggcggattggct
ttccataccgtctcgatggtgcggctggcccaaaaaatcgcgccgctgtaccataaagtc
aacgaagacctcttactggcgggcacactgctccacgatatgggcaagacccgggaactc
actgggcccactgccacccaatatcggccggagggtaacctgatcggccacgtggtgatg
attgatgaagaaatcattcgcgcctgcgacaagctccagctggacagtcacagcgaggcc
gtcatgcttttgcggcatatggtcctggcccaccacggcgagctcgactacggctcacct
gtgcggccgcagctgattgaagccgaattgctccaccaaatcgaccaaatggatgccagc
ttgaccatgatcaccatggcgctggatgataccaagccgggggagtattcggaacgcgtc
tttggtttagataaccggcgtttctatcagtcaaaaccaattgatgaccaaggttag
DBGET
integrated database retrieval system